RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 GAS6Q14393 721 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 ANO7Q6IWH7 933 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 TMEM220Q6QAJ8 160 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 NEK10Q6ZWH5 1172 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 TRAPPC5Q8IUR0 188 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 CAMKK1Q8N5S9 505 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 PTGR2Q8N8N7 351 aaPredicted RBP13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 PLA2G15Q8NCC3 412 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 OR2T34Q8NGX1 318 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 ASZ1Q8WWH4 475 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 GLMNQ92990 594 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 TMEM159Q96B96 161 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 PHF21BQ96EK2 531 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 COX14Q96I36 57 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 CNDP1Q96KN2 507 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 TMEM237Q96Q45 408 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 SORT1Q99523 831 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 SIKE1Q9BRV8 207 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 CCM2Q9BSQ5 444 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 ERVK-6Q9BXR3 956 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 C20orf27Q9GZN8 174 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 BTBD1Q9H0C5 482 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 OR2AG1Q9H205 316 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 SGK2Q9HBY8 427 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 PARD6AQ9NPB6 346 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 PHPT1Q9NRX4 125 aaPredicted RBP13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 CD274Q9NZQ7 290 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 USP36Q9P275 1121 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 MBD1Q9UIS9 605 aaPredicted RBP13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 DNAJC16Q9Y2G8 782 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 RAP2CQ9Y3L5 183 aa13.59□□□□□ -0.23
PDLIM5-203ENST00000359265 PLXND1Q9Y4D7 1925 aa13.58□□□□□ -0.23
PDLIM5-203ENST00000359265 STX16-NPEPL1H3BU86 382 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 STX16O14662 325 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 KLK8O60259 260 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 ZNF217O75362 1048 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 PAK4O96013 591 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 IGLV3-19P01714 112 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 C8GP07360 202 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 MTHFD2P13995 350 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 PBLDP30039 288 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 CCR3P51677 355 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 HK2P52789 917 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 DMWDQ09019 674 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 HSPA14Q0VDF9 509 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 SF3A3Q12874 501 aaKnown RBP eCLIP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 PRKAA1Q13131 559 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 SP140Q13342 867 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 SBSNQ6UWP8 590 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 TRIM69Q86WT6 500 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 C1orf210Q8IVY1 113 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 WDR75Q8IWA0 830 aaKnown RBP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 KIRREL3Q8IZU9 778 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 BEND7Q8N7W2 519 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 DENND6BQ8NEG7 585 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 PIWIL2Q8TC59 973 aaKnown RBP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 C10orf82Q8WW14 230 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 KLK6Q92876 244 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 THOC1Q96FV9 657 aaKnown RBP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 LENG8Q96PV6 779 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 HHIPQ96QV1 700 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 TRMOQ9BU70 441 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 TEX101Q9BY14 249 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 ILKAPQ9H0C8 392 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 WDR26Q9H7D7 661 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 ZNF395Q9H8N7 513 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 EML4Q9HC35 981 aaKnown RBP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 ITM2CQ9NQX7 267 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 ATXN10Q9UBB4 475 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 OARD1Q9Y530 152 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 USH1CQ9Y6N9 552 aa13.58□□□□□ -0.24
PDLIM5-203ENST00000359265 PABPN1LA6NDY0 278 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 GPR89AB7ZAQ6 455 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 LIN7AO14910 233 aaPredicted RBP13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 SLC16A5O15375 505 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 ENO2P09104 434 aaPredicted RBP13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 GPR89BP0CG08 455 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 ZNF8P17098 575 aaPredicted RBP13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 ARRB2P32121 409 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 IGFALSP35858 605 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 MAPK9P45984 424 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 ALDH18A1P54886 795 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 PPP2CBP62714 309 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 PPP2CAP67775 309 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 MTAPQ13126 283 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 TGFBIQ15582 683 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 PFKFB4Q16877 469 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 ARL13AQ5H913 290 aaPredicted RBP13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 ZNF678Q5SXM1 525 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 DOK6Q6PKX4 331 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 CYHR1Q6ZMK1 362 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 MAMSTRQ6ZN01 415 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 FRMD7Q6ZUT3 714 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 AFAP1L2Q8N4X5 818 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 SKA2Q8WVK7 121 aaPredicted RBP13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 LINC00615Q96LM1 132 aaPredicted RBP13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 TRIM54Q9BYV2 358 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 MBNL1Q9NR56 388 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 MARCOQ9UEW3 520 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms