RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 KPNB1Q14974 876 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 BATFQ16520 125 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 CCNJLQ8IV13 435 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 ZNF100Q8IYN0 542 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 BSNDQ8WZ55 320 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 GTPBP3Q969Y2 492 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 CIDECQ96AQ7 238 aaPredicted RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 ALPK1Q96QP1 1244 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 NMUR1Q9HB89 426 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 PDP2Q9P2J9 529 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 C14orf166Q9Y224 244 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 PCDHA3Q9Y5H8 950 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 AURKAO14965 403 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 ATP6V1G1O75348 118 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 SMIM10L2AP0DMW4 78 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 SMIM10L2BP0DMW5 78 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 NELFEP18615 380 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 ACSL1P33121 698 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 SREBF1P36956 1147 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 PLA2G16P53816 162 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 KDELC1Q6UW63 502 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 GLIS3Q8NEA6 775 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 OR7G1Q8NGA0 311 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 SEMA3CQ99985 751 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 POPDC2Q9HBU9 364 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 ABCD2Q9UBJ2 740 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 EIF3KQ9UBQ5 218 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 EVLQ9UI08 416 aaPredicted RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 PXDNQ92626 1479 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 SLC35F4A4IF30 521 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 CREB1P16220 341 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 CALB2P22676 271 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 CNTFP26441 200 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 GDI1P31150 447 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 HERV-K104P61576 105 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 SNTA1Q13424 505 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 PTPRNQ16849 979 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 VTCN1Q7Z7D3 282 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 CREG2Q8IUH2 290 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 TTTY10Q9BZA0 68 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 TRPV4Q9HBA0 871 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 FBRSL1Q9HCM7 1045 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 SDHAF3Q9NRP4 125 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 CNOT11Q9UKZ1 510 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 TNS2Q63HR2 1409 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 KAT7O95251 611 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 EDN3P14138 238 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 CPN2P22792 545 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 OR12D2P58182 307 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 SSTP61278 116 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 DLG4P78352 724 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 IFI35P80217 286 aaPredicted RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 PDGFRLQ15198 375 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 SSX2Q16385 188 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 PLEKHG4Q58EX7 1191 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 INTS6LQ5JSJ4 861 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 ZNF571Q7Z3V5 609 aaPredicted RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 ARHGAP22Q7Z5H3 698 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 BEND7Q8N7W2 519 aaPredicted RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 FAM46DQ8NEK8 389 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 PIAS1O75925 651 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 STK17BO94768 372 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 PDYNP01213 254 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 CLEC3BP05452 202 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 PVALBP20472 110 aaPredicted RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 LIPEQ05469 1076 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 FSTL1Q12841 308 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 ADRM1Q16186 407 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 FBXO48Q5FWF7 155 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 IFNL1Q8IU54 200 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 PHTF2Q8N3S3 785 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 EIF1ADQ8N9N8 165 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 OR6N1Q8NGY5 312 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 GATAD2BQ8WXI9 593 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 ADAD1Q96M93 576 aaKnown RBP9.64□□□□□ -0.87
CHD3-202ENST00000358181 LRFN1Q9P244 771 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 OR12D3Q9UGF7 316 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 ACTL7BQ9Y614 415 aa9.64□□□□□ -0.87
CHD3-202ENST00000358181 ANKRD63C9JTQ0 380 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 RECQL5O94762 991 aaPredicted RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 RPL3P39023 403 aaKnown RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 TGFB2P61812 414 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 KANK2Q63ZY3 851 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 CCNI2Q6ZMN8 369 aaPredicted RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 CRYBG2Q8N1P7 616 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 C17orf50Q8WW18 174 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 PDCD1LG2Q9BQ51 273 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 ALG2Q9H553 416 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 KCND2Q9NZV8 630 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 EGFL7Q9UHF1 273 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 TMPRSS11EQ9UL52 423 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 CFL2Q9Y281 166 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 KCNE2Q9Y6J6 123 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 TEX13CA0A0J9YWL9 993 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 NPR2P20594 1047 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 OTX2P32243 289 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 MRPL49Q13405 166 aaKnown RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 AARDQ4LEZ3 155 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 EGFL6Q8IUX8 553 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 TRPM4Q8TD43 1214 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms