RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 YY2O15391 372 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 MT-ND3P03897 115 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 SYPP08247 313 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 GSTM1P09488 218 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 ZNF806P0C7X5 589 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 PYGBP11216 843 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 CREB1P16220 341 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 VCLP18206 1134 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 EPHA8P29322 1005 aaPredicted RBP24.85■■□□□ 1.57
SSBP3-202ENST00000357475 CRABP2P29373 138 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 ARRB1P49407 418 aaPredicted RBP24.85■■□□□ 1.57
SSBP3-202ENST00000357475 CLCNKAP51800 687 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 GSTM4Q03013 218 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 TNFAIP8L3Q5GJ75 292 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 TRABD2AQ86V40 505 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 SLC22A15Q8IZD6 547 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 PATE1Q8WXA2 126 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 ARL8AQ96BM9 186 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 RMDN2Q96LZ7 410 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 ZDHHC5Q9C0B5 715 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 KLHL42Q9P2K6 505 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 NCDNQ9UBB6 729 aa24.85■■□□□ 1.57
SSBP3-202ENST00000357475 CFAP20Q9Y6A4 193 aaKnown RBP24.85■■□□□ 1.57
SSBP3-202ENST00000357475 A6NCN8 305 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 KPNA5O15131 536 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 MYZAPP0CAP1 466 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 GIMD1P0DJR0 217 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 DNAJC3Q13217 504 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 CLCA4Q14CN2 919 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 ELOCQ15369 112 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 DEFB133Q30KQ1 61 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 IL27RAQ6UWB1 636 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 CYHR1Q6ZMK1 362 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 CENPLQ8N0S6 344 aaPredicted RBP24.84■■□□□ 1.57
SSBP3-202ENST00000357475 C4orf33Q8N1A6 199 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 MINDY1Q8N5J2 469 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 KCTD4Q8WVF5 259 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 GLMNQ92990 594 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 ZNF358Q9NW07 568 aa24.84■■□□□ 1.57
SSBP3-202ENST00000357475 FFAR2O15552 330 aa24.83■■□□□ 1.57
SSBP3-202ENST00000357475 KCNJ13O60928 360 aa24.83■■□□□ 1.57
SSBP3-202ENST00000357475 CCDC166P0CW27 439 aa24.83■■□□□ 1.57
SSBP3-202ENST00000357475 IDSP22304 550 aa24.83■■□□□ 1.57
SSBP3-202ENST00000357475 TGM1P22735 817 aa24.83■■□□□ 1.57
SSBP3-202ENST00000357475 CSHL1Q14406 222 aa24.83■■□□□ 1.57
SSBP3-202ENST00000357475 TTLL9Q3SXZ7 439 aa24.83■■□□□ 1.57
SSBP3-202ENST00000357475 DUS1LQ6P1R4 473 aaKnown RBP24.83■■□□□ 1.57
SSBP3-202ENST00000357475 SRRM1Q8IYB3 904 aaKnown RBP24.83■■□□□ 1.57
SSBP3-202ENST00000357475 SAP25Q8TEE9 199 aa24.83■■□□□ 1.57
SSBP3-202ENST00000357475 UBXN10Q96LJ8 280 aa24.83■■□□□ 1.57
SSBP3-202ENST00000357475 IGSF5Q9NSI5 407 aa24.83■■□□□ 1.57
SSBP3-202ENST00000357475 SEMA4GQ9NTN9 838 aa24.83■■□□□ 1.57
SSBP3-202ENST00000357475 ARID1BQ8NFD5 2236 aaPredicted RBP24.83■■□□□ 1.56
SSBP3-202ENST00000357475 TRBV23OR9-2A0A075B6M9 112 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 KLHL33A6NCF5 533 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 OR52A4PA6NMU1 304 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 PDZK1P1A8MUH7 402 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 CER1O95813 267 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 IL2P60568 153 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 ABRQ12979 859 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 FSTL5Q8N475 847 aaPredicted RBP24.82■■□□□ 1.56
SSBP3-202ENST00000357475 FAM46DQ8NEK8 389 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 NXNL1Q96CM4 212 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 PGM2Q96G03 612 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 SH3GL2Q99962 352 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.82■■□□□ 1.56
SSBP3-202ENST00000357475 ACOT9Q9Y305 439 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 ANKRD12Q6UB98 2062 aa24.82■■□□□ 1.56
SSBP3-202ENST00000357475 PRAMEF33A0A0G2JMD5 474 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 LMO7DNF2Z398 122 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 MPOP05164 745 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 ACADLP28330 430 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 NHLH1Q02575 133 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 RPA4Q13156 261 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 TAF1BQ53T94 588 aaPredicted RBP24.81■■□□□ 1.56
SSBP3-202ENST00000357475 CAPRIN2Q6IMN6 1127 aaKnown RBP24.81■■□□□ 1.56
SSBP3-202ENST00000357475 CLEC14AQ86T13 490 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 CFAP61Q8NHU2 1237 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 SKA2Q8WVK7 121 aaPredicted RBP24.81■■□□□ 1.56
SSBP3-202ENST00000357475 INSM2Q96T92 566 aaPredicted RBP24.81■■□□□ 1.56
SSBP3-202ENST00000357475 DPEP2Q9H4A9 486 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 SYTL2Q9HCH5 934 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 TLK1Q9UKI8 766 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 ADAMTS6Q9UKP5 1117 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 ACSL5Q9ULC5 683 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 A0A087X1B8 175 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 KRT87PA6NCN2 255 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 PROB1E7EW31 1015 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 SLC35G4P0C7Q5 338 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 KRT4P19013 534 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 CCNFP41002 786 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 CCT8P50990 548 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 TTMPQ5BVD1 217 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 PDZD3Q86UT5 571 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 EXOC3L1Q86VI1 746 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 GKN2Q86XP6 184 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 NAGSQ8N159 534 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 PCOLCE2Q9UKZ9 415 aa24.81■■□□□ 1.56
SSBP3-202ENST00000357475 B4DGG1 531 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 CDC7O00311 574 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms