RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 EME2A4GXA9 379 aaPredicted RBP12.68□□□□□ -0.38
SMC4-202ENST00000357388 PRORSD1PA6NEY8 169 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 CCDC85CA6NKD9 419 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 GRM6O15303 877 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 TP73O15350 636 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 CLDN9O95484 217 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 LCN1P31025 176 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 CLCN2P51788 898 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 GTF2BQ00403 316 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 SNAP47Q5SQN1 464 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 C6orf183Q5T699 404 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 TLE6Q9H808 572 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 THUMPD1Q9NXG2 353 aaKnown RBP12.68□□□□□ -0.38
SMC4-202ENST00000357388 ZNF69Q9UC07 566 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 PGAM2P15259 253 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 UBA1P22314 1058 aaKnown RBP12.68□□□□□ -0.38
SMC4-202ENST00000357388 IDH3AP50213 366 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 GBX2P52951 348 aaPredicted RBP12.68□□□□□ -0.38
SMC4-202ENST00000357388 EIPR1Q53HC9 387 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 ATAT1Q5SQI0 421 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 C9orf64Q5T6V5 341 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 SLC22A16Q86VW1 577 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 TMEM126BQ8IUX1 230 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 OR4C6Q8NH72 309 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 ASB12Q8WXK4 309 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 ZFP3Q96NJ6 502 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 EBF2Q9HAK2 575 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 UBQLN2Q9UHD9 624 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 NFATC1O95644 943 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 MC4RP32245 332 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 CATSPERGQ6ZRH7 1159 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 PLPPR4Q7Z2D5 763 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 C17orf64Q86WR6 236 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 LINC00471Q8N535 108 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 HDAC10Q969S8 669 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 TCEAL4Q96EI5 215 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 TM6SF2Q9BZW4 377 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 OR2B2Q9GZK3 357 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 LRRC42Q9Y546 428 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 GADD45GO95257 159 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 SLC25A14O95258 325 aaPredicted RBP12.68□□□□□ -0.38
SMC4-202ENST00000357388 HMGN1P05114 100 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 LINGO3P0C6S8 592 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 TFPIP10646 304 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 GNAZP19086 355 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 ITPKBP27987 946 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 CDH12P55289 794 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 SRSF11Q05519 484 aaKnown RBP12.68□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D25Q3MII6 688 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 CMC1Q7Z7K0 106 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 CAMK1GQ96NX5 476 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 PHB2Q99623 299 aa12.68□□□□□ -0.38
SMC4-202ENST00000357388 AGO1Q9UL18 857 aaKnown RBP12.68□□□□□ -0.38
SMC4-202ENST00000357388 CNOT6Q9ULM6 557 aaKnown RBP12.68□□□□□ -0.38
SMC4-202ENST00000357388 FAM149AA5PLN7 773 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 NPEPPSL1A6NEC2 478 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 TACSTD2P09758 323 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 SSR2P43308 183 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 TXNL4AP83876 142 aaKnown RBP12.67□□□□□ -0.38
SMC4-202ENST00000357388 INTS6LQ5JSJ4 861 aaKnown RBP12.67□□□□□ -0.38
SMC4-202ENST00000357388 CDKL4Q5MAI5 379 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 PAQR7Q86WK9 346 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 TIGD4Q8IY51 512 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 ASCC1Q8N9N2 400 aaKnown RBP12.67□□□□□ -0.38
SMC4-202ENST00000357388 SPPL2BQ8TCT7 592 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 DEC1Q9P2X7 70 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 RP2O75695 350 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 CCNFP41002 786 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 CD83Q01151 205 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 VGLL4Q14135 290 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 IL23RQ5VWK5 629 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 ALKBH2Q6NS38 261 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 OR2L2Q8NH16 312 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 C5orf34Q96MH7 638 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 MCMBPQ9BTE3 642 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 MIOSQ9NXC5 875 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 PCDHGB2Q9Y5G2 931 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 ZNF208O43345 1280 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 PRAMEF12O95522 483 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 AKT2P31751 481 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 MSX2P35548 267 aaPredicted RBP12.67□□□□□ -0.38
SMC4-202ENST00000357388 ZNF132P52740 706 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 CERS6Q6ZMG9 384 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 DRAXINQ8NBI3 349 aaPredicted RBP12.67□□□□□ -0.38
SMC4-202ENST00000357388 PCDH19Q8TAB3 1148 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 THRSPQ92748 146 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 NKD2Q969F2 451 aaPredicted RBP12.67□□□□□ -0.38
SMC4-202ENST00000357388 APOLD1Q96LR9 279 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 TSSK3Q96PN8 268 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 ZNF282Q9UDV7 671 aaPredicted RBP12.67□□□□□ -0.38
SMC4-202ENST00000357388 FXYD6-FXYD2A0A087WZ82 144 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 DNAJB5O75953 348 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 C22orf31O95567 290 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 DBIP07108 87 aaKnown RBP12.67□□□□□ -0.38
SMC4-202ENST00000357388 CLUP10909 449 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 SRCP12931 536 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 PKMP14618 531 aaKnown RBP12.67□□□□□ -0.38
SMC4-202ENST00000357388 GLDCP23378 1020 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 GNALP38405 381 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms