RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ZNF639Q9UID6 485 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 ATRNO75882 1429 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 FAM172BPA6NC97 362 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 TMEM88BA6NKF7 163 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 MSI1O43347 362 aaKnown RBP6.38□□□□□ -1.39
UPF2-201ENST00000356352 ORC5O43913 435 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 SASH3O75995 380 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 ITIH1P19827 911 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 AGXTP21549 392 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 TIE1P35590 1138 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 TSPAN5P62079 268 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 ADAM8P78325 824 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 RIPPLY1Q0D2K3 151 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 ADGRD1Q6QNK2 874 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 MBOAT1Q6ZNC8 495 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 GALNT5Q7Z7M9 940 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 PACS2Q86VP3 889 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 P2RY8Q86VZ1 359 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 GPR65Q8IYL9 337 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 OR6K2Q8NGY2 324 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 NKD2Q969F2 451 aaPredicted RBP6.38□□□□□ -1.39
UPF2-201ENST00000356352 ZSWIM3Q96MP5 696 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 DEFB118Q96PH6 123 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 GAL3ST4Q96RP7 486 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 MIPEPQ99797 713 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 SDCBP2Q9H190 292 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 RNF121Q9H920 327 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 SP140LQ9H930 580 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 C1orf109Q9NX04 203 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 STOX2Q9P2F5 926 aaPredicted RBP6.38□□□□□ -1.39
UPF2-201ENST00000356352 FBXW2Q9UKT8 454 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 PHF24Q9UPV7 400 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 PCDHGA3Q9Y5H0 932 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 KCNU1A8MYU2 1149 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 H0YGN5 161 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 AGRPO00253 132 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 GSC2O15499 205 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 DUSP11O75319 330 aaKnown RBP6.38□□□□□ -1.39
UPF2-201ENST00000356352 ITGA10O75578 1167 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 RPLP0P05388 317 aaKnown RBP6.38□□□□□ -1.39
UPF2-201ENST00000356352 DCKP27707 260 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 PDHA2P29803 388 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 UGT1A3P35503 534 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 RBM34P42696 430 aaKnown RBP6.38□□□□□ -1.39
UPF2-201ENST00000356352 KCNJ2P63252 427 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 CHIT1Q13231 466 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 EEF1DP3Q658K8 133 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 FUT10Q6P4F1 479 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 MON1BQ7L1V2 547 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 IRF2BP2Q7Z5L9 587 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 FSTL5Q8N475 847 aaPredicted RBP6.38□□□□□ -1.39
UPF2-201ENST00000356352 MINDY2Q8NBR6 621 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 JOSD2Q8TAC2 188 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 NXPE2Q96DL1 559 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 ERMAPQ96PL5 475 aaPredicted RBP6.38□□□□□ -1.39
UPF2-201ENST00000356352 AIFM2Q9BRQ8 373 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 CRTAC1Q9NQ79 661 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 NKIRAS2Q9NYR9 191 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 GTF2IRD1Q9UHL9 959 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 RPL36Q9Y3U8 105 aaKnown RBP6.38□□□□□ -1.39
UPF2-201ENST00000356352 SPIN1Q9Y657 262 aaPredicted RBP6.38□□□□□ -1.39
UPF2-201ENST00000356352 FKBP7Q9Y680 259 aa6.38□□□□□ -1.39
UPF2-201ENST00000356352 OR2AG2A6NM03 316 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 SCAMP3O14828 347 aaKnown RBP6.37□□□□□ -1.39
UPF2-201ENST00000356352 SLC7A4O43246 635 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 CCNKO75909 580 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 STBD1O95210 358 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 SPATA31C1P0DKV0 1188 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 ICAM3P32942 547 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 SLC13A2Q13183 592 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 PTPN20Q4JDL3 420 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 TPGS2Q68CL5 300 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 ANO7Q6IWH7 933 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 OTOP3Q7RTS5 596 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 ADGRD2Q7Z7M1 963 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 DQX1Q8TE96 717 aaKnown RBP6.37□□□□□ -1.39
UPF2-201ENST00000356352 NXNL1Q96CM4 212 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 JSRP1Q96MG2 331 aaPredicted RBP6.37□□□□□ -1.39
UPF2-201ENST00000356352 ZNF599Q96NL3 588 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 CCDC115Q96NT0 180 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 ST6GALNAC4Q9H4F1 302 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 LRRC4CQ9HCJ2 640 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 SDHAF3Q9NRP4 125 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 BAIAP2Q9UQB8 552 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 C9J4A7 227 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 IRAK2O43187 625 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 COQ9O75208 318 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 GADD45GO95257 159 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 HMGN1P05114 100 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 MTHFD1P11586 935 aaKnown RBP6.37□□□□□ -1.39
UPF2-201ENST00000356352 GSTM3P21266 225 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 MPIP34949 423 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 MARCKSL1P49006 195 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 CBX3Q13185 183 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 TMEM164Q5U3C3 297 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 TATDN1Q6P1N9 297 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 GALNTL5Q7Z4T8 443 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 ZMIZ2Q8NF64 920 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 C1orf216Q8TAB5 229 aa6.37□□□□□ -1.39
UPF2-201ENST00000356352 GPR152Q8TDT2 470 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms