RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PNLIPRP1P54315 467 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 PCDH1Q08174 1060 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF267Q14586 743 aaPredicted RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 USF2Q15853 346 aaPredicted RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 BTBD16Q32M84 506 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAM151BQ6UXP7 276 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 TIFAQ96CG3 184 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 RNF31Q96EP0 1072 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 PPP1R16AQ96I34 528 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 PIWIL1Q96J94 861 aaKnown RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF696Q9H7X3 374 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 TBC1D14Q9P2M4 693 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 GPN3Q9UHW5 284 aaPredicted RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 MAP4K5Q9Y4K4 846 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 KIF20BQ96Q89 1820 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 H3BM21 787 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 CILPO75339 1184 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 CD48P09326 243 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF182P17025 639 aaPredicted RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 CD247P20963 164 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 GDF10P55107 478 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 RHBDF2Q6PJF5 856 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 KLHL36Q8N4N3 616 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ADAMTS15Q8TE58 950 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 AIFM2Q9BRQ8 373 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 DDX4Q9NQI0 724 aaKnown RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 RNF6Q9Y252 685 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 WRBO00258 174 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 DLGAP1O14490 977 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 UBA1P22314 1058 aaKnown RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 RPS14P62263 151 aaKnown RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 TBRG1Q3YBR2 411 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 EMC10Q5UCC4 262 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 FBXL19Q6PCT2 694 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 BPIFB1Q8TDL5 484 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZBTB26Q9HCK0 441 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAIMQ9NVQ4 179 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 TVP23BQ9NYZ1 205 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF282Q9UDV7 671 aaPredicted RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 SCAMP3O14828 347 aaKnown RBP12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ENTPD6O75354 484 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ERN1O75460 977 aaKnown RBP12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 SLC25A14O95258 325 aaPredicted RBP12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 NDST3O95803 873 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 AMHP03971 560 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 RLN2P04090 185 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 POU2F1P14859 743 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 IMPDH1P20839 514 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 C2orf80Q0P641 193 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 PARP15Q460N3 678 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 TSTD2Q5T7W7 516 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ATCAYQ86WG3 371 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 SPERTQ8NA61 448 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 OR4K2Q8NGD2 314 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 XAGE5Q8WWM1 108 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZUFSPQ96AP4 578 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 OR52B2Q96RD2 323 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 MCMBPQ9BTE3 642 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ATPIF1Q9UII2 106 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 CMAHPQ9Y471 501 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ST14Q9Y5Y6 855 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ARPC4-TTLL3A0A0A6YYG9 625 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 C7P10643 843 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 WEE1P30291 646 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 CEBPGP53567 150 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 IKBKEQ14164 716 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 TMEM198Q66K66 360 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ANKRD26P1Q6NSI1 321 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ADGRG2Q8IZP9 1017 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF548Q8NEK5 533 aaPredicted RBP12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 SLC35B2Q8TB61 432 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 HDAC2Q92769 488 aaKnown RBP12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZIM2Q9NZV7 527 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF639Q9UID6 485 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 H0YAE9 185 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 PAGE1O75459 146 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 DNAJB1P25685 340 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 CLK3P49761 638 aaKnown RBP12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 RGS8P57771 180 aaPredicted RBP12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 CACNG1Q06432 222 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 TMEM17Q86X19 198 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 IQCF2Q8IXL9 164 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 NIPA2Q8N8Q9 360 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 NETO2Q8NC67 525 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 TMEM209Q96SK2 561 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 CALML5Q9NZT1 146 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 SEC14L4Q9UDX3 406 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 DCLK1O15075 740 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 SLC7A4O43246 635 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 KLRC2P26717 231 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 MAGEA12P43365 314 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 HERVK_113P63132 956 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 RPL6Q02878 288 aaKnown RBP12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 MFSD10Q14728 455 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 C9orf64Q5T6V5 341 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 DCAF12L1Q5VU92 463 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 ASB18Q6ZVZ8 466 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 SAMD7Q7Z3H4 446 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 KLHL6Q8WZ60 621 aa12.53□□□□□ -0.4
SYNCRIP-201ENST00000355238 FATE1Q969F0 183 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms