RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 OSR1Q8TAX0 266 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 NOC3LQ8WTT2 800 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 MRPL38Q96DV4 380 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TSPAN18Q96SJ8 248 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 GTPBP2Q9BX10 602 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 C1QTNF3Q9BXJ4 246 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 RAD21L1Q9H4I0 556 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 MMRN2Q9H8L6 949 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 MSL2Q9HCI7 577 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CHMP1AQ9HD42 196 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ANO10Q9NW15 660 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PTTG2Q9NZH5 202 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 MSRB1Q9NZV6 116 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 STX8Q9UNK0 236 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 FZD1Q9UP38 647 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 AGTPBP1Q9UPW5 1226 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 RRP15Q9Y3B9 282 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 RNF114Q9Y508 228 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SSC5DA1L4H1 1573 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 NRKQ7Z2Y5 1582 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SETXQ7Z333 2677 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CCDC151A5D8V7 595 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM221A6NGB7 291 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 C5orf52A6NGY3 159 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 EIF4E1BA6NMX2 242 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 H0YIN7 160 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PTGESO14684 152 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SMAD9O15198 467 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 WDR46O15213 610 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ASAP2O43150 1006 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ADAM12O43184 909 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PPIP5K2O43314 1243 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 RTN2O75298 545 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 MED24O75448 989 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 DLATP10515 647 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 NCF1P14598 390 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TYMPP19971 482 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CASTP20810 708 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 LMO1P25800 156 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 HOXD9P28356 352 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TACR3P29371 465 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CCND3P30281 292 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CTNNB1P35222 781 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PCGF2P35227 344 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PRCPP42785 496 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ATXN3P54252 364 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 GALK2Q01415 458 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF415Q09FC8 603 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PNRC1Q12796 327 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TRAF1Q13077 416 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 RPS6KA1Q15418 735 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 LACTB2Q53H82 288 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 VWA5B1Q5TIE3 1220 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SHEQ5VZ18 495 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 VSTM1Q6UX27 236 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 BTNL8Q6UX41 500 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF517Q6ZMY9 492 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF66Q6ZN08 573 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 LINGO2Q7L985 606 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 IRF2BP2Q7Z5L9 587 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ABI3BPQ7Z7G0 1075 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZER1Q7Z7L7 766 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TBC1D21Q8IYX1 336 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 KIAA0895Q8NCT3 520 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 LPCAT1Q8NF37 534 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ENGASEQ8NFI3 743 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SLC13A3Q8WWT9 602 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 KAT2BQ92831 832 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 DNASE1L2Q92874 299 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 RIT1Q92963 219 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CAVIN3Q969G5 261 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 AP2M1Q96CW1 435 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PDLIM2Q96JY6 352 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF560Q96MR9 790 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 WDR77Q9BQA1 342 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 MRPL1Q9BYD6 325 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF350Q9GZX5 532 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 WDR26Q9H7D7 661 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CLK4Q9HAZ1 481 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PSD3Q9NYI0 1048 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 FBXO40Q9UH90 709 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM184BQ9Y519 407 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PRUNE2Q8WUY3 3088 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TLR4O00206 839 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SLC33A1O00400 549 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 UTYO14607 1347 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 IKBKBO14920 756 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 RNMTO43148 476 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 OR10H2O60403 315 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 FCGR3BO75015 233 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PCNTO95613 3336 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TGFAP01135 160 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 GH2P01242 217 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 GJA1P17302 382 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 UGT1A6P19224 532 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 JAK1P23458 1154 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 AHCYP23526 432 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ALDH1B1P30837 517 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 AKT2P31751 481 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TDO2P48775 406 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms