RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 S1PR4O95977 384 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 CISD3P0C7P0 127 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 MTHFD1P11586 935 aaKnown RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 VARSP26640 1264 aaKnown RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 LTBRP36941 435 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 RHOAP61586 193 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 NFKB2Q00653 900 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 INPP5AQ14642 412 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 TMEM184AQ6ZMB5 413 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 MIER2Q8N344 545 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 RYBPQ8N488 228 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 TNIP2Q8NFZ5 429 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 CYB5D2Q8WUJ1 264 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 TWIST2Q8WVJ9 160 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 CYGBQ8WWM9 190 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 HDAC10Q969S8 669 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 CENPNQ96H22 339 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 MYO19Q96H55 970 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 TBATAQ96M53 351 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 COG8Q96MW5 612 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 NSUN5Q96P11 429 aaKnown RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 MYADMQ96S97 322 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 C9orf16Q9BUW7 83 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 LMAN2LQ9H0V9 348 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 MID1IP1Q9NPA3 183 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 SLC52A3Q9NQ40 469 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 DOCK9Q9BZ29 2069 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 TYW5A2RUC4 315 aaKnown RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 GPR39O43194 453 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 RASAL1O95294 804 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 SLC4A1P02730 911 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 FGF4P08620 206 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 ALPIP09923 528 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 MTHFD2P13995 350 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 CD1DP15813 335 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 TCF3P15923 654 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 FSHRP23945 695 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 CA5AP35218 305 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 SOX11P35716 441 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 SEMA3AQ14563 771 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 RAB39AQ14964 217 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 GPR107Q5VW38 600 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 ANKRD54Q6NXT1 300 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 CHRDL2Q6WN34 429 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 Q6ZNX1 250 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 CHST15Q7LFX5 561 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 SPRED1Q7Z699 444 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 KIAA0907Q7Z7F0 614 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF554Q86TJ5 538 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 IFNEQ86WN2 208 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 DDIASQ8IXT1 998 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 CELF5Q8N6W0 485 aaKnown RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF366Q8N895 744 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 PTGR2Q8N8N7 351 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 SMYD1Q8NB12 490 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 TRPV3Q8NET8 790 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 LPCAT1Q8NF37 534 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 PPP1R2P1Q96PQ5 205 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 C2orf49Q9BVC5 232 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 S1PR5Q9H228 398 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 TTYH1Q9H313 450 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 SOX17Q9H6I2 414 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 RPF2Q9H7B2 306 aaKnown RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 SDR39U1Q9NRG7 319 aaPredicted RBP8.47□□□□□ -1.05
TRIM55-204ENST00000353317 FAIMQ9NVQ4 179 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 FBXO10Q9UK96 956 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 CDH7Q9ULB5 785 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 PCDHA9Q9Y5H5 950 aa8.47□□□□□ -1.05
TRIM55-204ENST00000353317 A0A1W2PPW3 197 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 HEPACAM2A8MVW5 462 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 ANKRD66B4E2M5 251 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 UBXN8O00124 270 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 AZIN1O14977 448 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 INPP4BO15327 924 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 CLOCKO15516 846 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 SLC7A4O43246 635 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 BNIP3LO60238 219 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 NDST3O95803 873 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 EPOP01588 193 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 TFPTP0C1Z6 253 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 LINC00032P0C843 101 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 PABPC1P11940 636 aaKnown RBP8.46□□□□□ -1.05
TRIM55-204ENST00000353317 GFAPP14136 432 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 HGFP14210 728 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 CTPS1P17812 591 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 BMP8BP34820 402 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 SLC26A3P40879 764 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 CDKN1CP49918 316 aaPredicted RBP8.46□□□□□ -1.05
TRIM55-204ENST00000353317 DIO3P55073 304 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 TIAL1Q01085 375 aaKnown RBP eCLIP8.46□□□□□ -1.05
TRIM55-204ENST00000353317 BNIP2Q12982 314 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 ADAM15Q13444 863 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 OR4D1Q15615 310 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 CYP51A1Q16850 503 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 PFKFB4Q16877 469 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 CYBRD1Q53TN4 286 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 RABL3Q5HYI8 236 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 FGD3Q5JSP0 725 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 PRMT9Q6P2P2 845 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF549Q6P9A3 640 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms