RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 RSL1D1O76021 490 aaKnown RBP21.74■■□□□ 1.07
UPF3A-201ENST00000351487 CLDN7O95471 211 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 HABP4Q5JVS0 413 aaKnown RBP21.74■■□□□ 1.07
UPF3A-201ENST00000351487 METTL3Q86U44 580 aaKnown RBP21.74■■□□□ 1.07
UPF3A-201ENST00000351487 SLC39A11Q8N1S5 342 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 RHBDF1Q96CC6 855 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 RPL10LQ96L21 214 aaKnown RBP21.74■■□□□ 1.07
UPF3A-201ENST00000351487 NSMCE2Q96MF7 247 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 OPTCQ9UBM4 332 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 PLXNB3Q9ULL4 1909 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 AGAP14A8MT82 685 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 H3BSA7 217 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 WDR47O94967 919 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 TRIM16O95361 564 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 CDH1P12830 882 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 SPAM1P38567 509 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 TXNDC8Q6A555 127 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 GLYATQ6IB77 296 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 DEFB128Q7Z7B8 93 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 HOMEZQ8IX15 550 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 BHMTQ93088 406 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 TMEM169Q96HH4 297 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 CAPNS2Q96L46 248 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 PPM1MQ96MI6 270 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 LYSMD1Q96S90 227 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 EGFL8Q99944 293 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 ATP13A3Q9H7F0 1226 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 SMPD3Q9NY59 655 aaPredicted RBP21.74■■□□□ 1.07
UPF3A-201ENST00000351487 WWOXQ9NZC7 414 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 CRLS1Q9UJA2 301 aa21.74■■□□□ 1.07
UPF3A-201ENST00000351487 RGS14O43566 566 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 TULP3O75386 442 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 SLC5A2P31639 672 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 MAD2L1Q13257 205 aaPredicted RBP21.73■■□□□ 1.07
UPF3A-201ENST00000351487 GRAMD4Q6IC98 578 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 TPGS1Q6ZTW0 290 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 RIMKLAQ8IXN7 391 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 NXPE1Q8N323 547 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 CPXM2Q8N436 756 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 DTWD1Q8N5C7 304 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 NTMT1Q9BV86 223 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 LATS2Q9NRM7 1088 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 TRPS1Q9UHF7 1281 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 ZMYM5Q9UJ78 669 aa21.73■■□□□ 1.07
UPF3A-201ENST00000351487 SLC28A1O00337 649 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 ZNF821O75541 412 aaPredicted RBP21.72■■□□□ 1.07
UPF3A-201ENST00000351487 IGSF6O95976 241 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 ASLP04424 464 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 UGT1A1P22309 533 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 UGT1A4P22310 534 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 UGT1A3P35503 534 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 UGT1A5P35504 534 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 DGKQP52824 942 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 RPL38P63173 70 aaKnown RBP21.72■■□□□ 1.07
UPF3A-201ENST00000351487 SELPLGQ14242 412 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 CHRNA6Q15825 494 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 TMEM259Q4ZIN3 620 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 MPP7Q5T2T1 576 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 TRIM46Q7Z4K8 759 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 ADAMTS16Q8TE57 1224 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 HIC2Q96JB3 615 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 CCDC115Q96NT0 180 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 CHID1Q9BWS9 393 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 APOL5Q9BWW9 433 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 ASIC5Q9NY37 505 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 RSL24D1Q9UHA3 163 aaKnown RBP21.72■■□□□ 1.07
UPF3A-201ENST00000351487 LSM7Q9UK45 103 aaKnown RBP21.72■■□□□ 1.07
UPF3A-201ENST00000351487 ANGPTL3Q9Y5C1 460 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 A0A087WXM4 84 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 K7EPI3 171 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 GKP32189 559 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 RPS9P46781 194 aaKnown RBP21.72■■□□□ 1.07
UPF3A-201ENST00000351487 PTPN5P54829 565 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 MTPNP58546 118 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 TTC33Q6PID6 262 aaPredicted RBP21.72■■□□□ 1.07
UPF3A-201ENST00000351487 ITIH5Q86UX2 942 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 AADATQ8N5Z0 425 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 SLC13A3Q8WWT9 602 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 ZNF558Q96NG5 402 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 BDH2Q9BUT1 245 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 ABCB8Q9NUT2 735 aa21.72■■□□□ 1.07
UPF3A-201ENST00000351487 EIF3LQ9Y262 564 aaKnown RBP21.72■■□□□ 1.07
UPF3A-201ENST00000351487 KCNH1O95259 989 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 URODP06132 367 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 EBLN1P0CF75 366 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 SLC2A4P14672 509 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 GGT1P19440 569 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 SOX11P35716 441 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 CAPGP40121 348 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 CDK9P50750 372 aaKnown RBP21.71■■□□□ 1.07
UPF3A-201ENST00000351487 LMAN2Q12907 356 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 TTLL9Q3SXZ7 439 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 PYCR3Q53H96 274 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 SPOUT1Q5T280 376 aaKnown RBP21.71■■□□□ 1.07
UPF3A-201ENST00000351487 RALGPS2Q86X27 583 aaPredicted RBP21.71■■□□□ 1.07
UPF3A-201ENST00000351487 ZSWIM9Q86XI8 627 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 SERPINA4P29622 427 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 GDF5P43026 501 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 CYBRD1Q53TN4 286 aa21.71■■□□□ 1.07
UPF3A-201ENST00000351487 ZNF786Q8N393 782 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms