RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 LRRC36Q1X8D7 754 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 SMU1Q2TAY7 513 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 PLEKHS1Q5SXH7 462 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 RARS2Q5T160 578 aaKnown RBP16.39■□□□□ 0.21
SAMM50-201ENST00000350028 TCAIMQ8N3R3 496 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 DCBLD1Q8N8Z6 715 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 TIFAQ96CG3 184 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 LRRC58Q96CX6 371 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 PPP3R2Q96LZ3 170 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 PCDHAC1Q9H158 963 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 DUS2Q9NX74 493 aaKnown RBP16.39■□□□□ 0.21
SAMM50-201ENST00000350028 SUN2Q9UH99 717 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 IL36AQ9UHA7 158 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 TRPS1Q9UHF7 1281 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 RIMS3Q9UJD0 308 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 LEF1Q9UJU2 399 aaPredicted RBP16.39■□□□□ 0.21
SAMM50-201ENST00000350028 DTNAQ9Y4J8 743 aa16.39■□□□□ 0.21
SAMM50-201ENST00000350028 MAGEA13PA6NCF6 341 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 CCDC154A6NI56 674 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 SLC28A1O00337 649 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 SLC16A5O15375 505 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 EEDO75530 441 aaKnown RBP16.38■□□□□ 0.21
SAMM50-201ENST00000350028 STK16O75716 305 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 AP2A2O94973 939 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 EBLN1P0CF75 366 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 EPB42P16452 691 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 XPAP23025 273 aaPredicted RBP16.38■□□□□ 0.21
SAMM50-201ENST00000350028 ZFP36L2P47974 494 aaKnown RBP16.38■□□□□ 0.21
SAMM50-201ENST00000350028 DGKGP49619 791 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 UFM1P61960 85 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 CBX2Q14781 532 aaPredicted RBP16.38■□□□□ 0.21
SAMM50-201ENST00000350028 GRAMD1BQ3KR37 738 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 ZNF805Q5CZA5 627 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 LRRC73Q5JTD7 316 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 HSD11B1LQ7Z5J1 315 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 ADCY4Q8NFM4 1077 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 MYLIPQ8WY64 445 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 ZUFSPQ96AP4 578 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 BTBD9Q96Q07 612 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 SLC12A9Q9BXP2 914 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 PIDD1Q9HB75 910 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 PCDH12Q9NPG4 1184 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 CHD9Q3L8U1 2897 aa16.38■□□□□ 0.21
SAMM50-201ENST00000350028 TCRBV3S1A0A5B6 114 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 GRXCR2A6NFK2 248 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 FXYD1O00168 92 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 IFRD1O00458 451 aaPredicted RBP16.37■□□□□ 0.21
SAMM50-201ENST00000350028 LSM1O15116 133 aaKnown RBP16.37■□□□□ 0.21
SAMM50-201ENST00000350028 HOXC11O43248 304 aaPredicted RBP16.37■□□□□ 0.21
SAMM50-201ENST00000350028 RGS14O43566 566 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 NPPAP01160 153 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 CYP17A1P05093 508 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 ADH5P11766 374 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 HSD17B1P14061 328 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 AKT1P31749 480 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 GGT5P36269 586 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 RPIAP49247 311 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 ATXN3P54252 364 aaPredicted RBP16.37■□□□□ 0.21
SAMM50-201ENST00000350028 BNIP2Q12982 314 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 NFYCQ13952 458 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 NR6A1Q15406 480 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 IRAK1BP1Q5VVH5 260 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 NEK10Q6ZWH5 1172 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 DPPA4Q7L190 304 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 DHFR2Q86XF0 187 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 SLC15A3Q8IY34 581 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 TRAM1L1Q8N609 369 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 ICA1LQ8NDH6 482 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 OSCP1Q8WVF1 389 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 SORCS1Q8WY21 1168 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 GATA6Q92908 595 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 C1orf50Q9BV19 199 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 VCXQ9H320 206 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 COPS7BQ9H9Q2 264 aaPredicted RBP16.37■□□□□ 0.21
SAMM50-201ENST00000350028 IL1RL2Q9HB29 575 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 PARVBQ9HBI1 364 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 CD84Q9UIB8 345 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 CHD7Q9P2D1 2997 aa16.37■□□□□ 0.21
SAMM50-201ENST00000350028 C9JVG2 144 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 NME4O00746 187 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 PER2O15055 1255 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 ADH1CP00326 375 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 CAPNS1P04632 268 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 UQCRBP14927 111 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 GDF5P43026 501 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 ST8SIA6P61647 398 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 PRKG2Q13237 762 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 MAD2L1Q13257 205 aaPredicted RBP16.36■□□□□ 0.21
SAMM50-201ENST00000350028 SP140Q13342 867 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 ABRAXAS2Q15018 415 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 AP5B1Q2VPB7 878 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 C6orf10Q5SRN2 563 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 UBE2R2Q712K3 238 aaPredicted RBP16.36■□□□□ 0.21
SAMM50-201ENST00000350028 GALNT13Q8IUC8 556 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 ITFG1Q8TB96 612 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 UCMAQ8WVF2 138 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 SMG7Q92540 1137 aaKnown RBP16.36■□□□□ 0.21
SAMM50-201ENST00000350028 LRCH3Q96II8 777 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 TEX37Q96LM6 180 aa16.36■□□□□ 0.21
SAMM50-201ENST00000350028 SLC39A3Q9BRY0 314 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms