RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 WDTC1Q8N5D0 677 aa10.5□□□□□ -0.73
CAPN3-203ENST00000349748 ZNF540Q8NDQ6 660 aa10.5□□□□□ -0.73
CAPN3-203ENST00000349748 CLEC4DQ8WXI8 215 aa10.5□□□□□ -0.73
CAPN3-203ENST00000349748 ARNTL2Q8WYA1 636 aa10.5□□□□□ -0.73
CAPN3-203ENST00000349748 FAM213AQ9BRX8 229 aa10.5□□□□□ -0.73
CAPN3-203ENST00000349748 ZNF416Q9BWM5 594 aa10.5□□□□□ -0.73
CAPN3-203ENST00000349748 NXF2Q9GZY0 626 aaKnown RBP10.5□□□□□ -0.73
CAPN3-203ENST00000349748 ACAD9Q9H845 621 aa10.5□□□□□ -0.73
CAPN3-203ENST00000349748 PEX16Q9Y5Y5 336 aa10.5□□□□□ -0.73
CAPN3-203ENST00000349748 U3KQ87 197 aa10.5□□□□□ -0.73
CAPN3-203ENST00000349748 FAM92AA1XBS5 289 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 CLDN24A6NM45 220 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 ANGPT2O15123 496 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 STX7O15400 261 aaKnown RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 PMPCBO75439 489 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 OLR1P78380 273 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 JAG1P78504 1218 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 HYAL2Q12891 473 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 TP53BP2Q13625 1128 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 ZNF691Q5VV52 312 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 RETSATQ6NUM9 610 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 XKRXQ6PP77 449 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 SPESP1Q6UW49 350 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 NIPA1Q7RTP0 329 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 CCDC36Q8IYA8 594 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 NLGN4YQ8NFZ3 816 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 DNAJA4Q8WW22 397 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 NRCAMQ92823 1304 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 USP7Q93009 1102 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 NCLNQ969V3 563 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 COQ8BQ96D53 544 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 LINC00052Q96N35 136 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 FRMD6Q96NE9 622 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 FCRL3Q96P31 734 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 DCLRE1CQ96SD1 692 aaKnown RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 SLC30A2Q9BRI3 323 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 AMNQ9BXJ7 453 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 TINAGL1Q9GZM7 467 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 SPNS1Q9H2V7 528 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 RANBP3Q9H6Z4 567 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 NIPAL2Q9H841 368 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 LRRC4Q9HBW1 653 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 KMT5AQ9NQR1 393 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 PRKAG2Q9UGJ0 569 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 USP18Q9UMW8 372 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 RUVBL2Q9Y230 463 aaKnown RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 RNF6Q9Y252 685 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 PCDHB14Q9Y5E9 798 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 PNMA8CA0A1B0GUJ8 204 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 F8W810 466 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 PITPNM1O00562 1244 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 FHP07954 510 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 ALDOCP09972 364 aaKnown RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 CD9P21926 228 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 HRH2P25021 359 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 GNPDA1P46926 289 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 BCAT1P54687 386 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 PLIN5Q00G26 463 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 ZNF460Q14592 562 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 GPAT2Q6NUI2 795 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 GALNT5Q7Z7M9 940 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 NT5DC4Q86YG4 428 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 FSTL5Q8N475 847 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 CARNMT1Q8N4J0 409 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 LRRC58Q96CX6 371 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 SGTBQ96EQ0 304 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 HOPXQ9BPY8 73 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 TBCDQ9BTW9 1192 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 OR51E2Q9H255 320 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 XPR1Q9UBH6 696 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 ELF5Q9UKW6 265 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-203ENST00000349748 STAP1Q9ULZ2 295 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 PRELID3BQ9Y3B1 194 aa10.49□□□□□ -0.73
CAPN3-203ENST00000349748 OR2A25A4D2G3 310 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 HNRNPCL2B2RXH8 293 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 PPP6CO00743 305 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 CABYRO75952 493 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 TSPAN8P19075 237 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 TNNI1P19237 187 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 SPRP35270 261 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 CASP2P42575 452 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 ARHGDIBP52566 201 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 LIMK2P53671 638 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 FRG1Q14331 258 aaKnown RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 ALFQ53S48 1182 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 TSTD2Q5T7W7 516 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 TDRD10Q5VZ19 366 aaKnown RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 ZNF470Q6ECI4 717 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 CLEC6AQ6EIG7 209 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 CYS1Q717R9 158 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 RIMKLAQ8IXN7 391 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 C9orf62Q8N4C0 152 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 GTF3C2Q8WUA4 911 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 KLHL6Q8WZ60 621 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 PTP4A1Q93096 173 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 SLC38A4Q969I6 547 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 REPS1Q96D71 796 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 ZNF668Q96K58 619 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 CPNE1Q99829 537 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 CCDC32Q9BV29 185 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms