RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 PLOD1Q02809 727 aaPredicted RBP15.17■□□□□ 0.02
UPF3B-202ENST00000345865 PTGR1Q14914 329 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 FXNQ16595 210 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 MACC1Q6ZN28 852 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 NXPE1Q8N323 547 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 CENPNQ96H22 339 aaPredicted RBP15.17■□□□□ 0.02
UPF3B-202ENST00000345865 EGFL8Q99944 293 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 CD244Q9BZW8 370 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 ATP13A3Q9H7F0 1226 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 SPG21Q9NZD8 308 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 NDUFA13Q9P0J0 144 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 SLC4A7Q9Y6M7 1214 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 V9GYQ6 96 aa15.17■□□□□ 0.02
UPF3B-202ENST00000345865 AGAP14A8MT82 685 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 H3BNH8 94 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 TGM5O43548 720 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 BNIP3LO60238 219 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 PARNO95453 639 aaKnown RBP15.16■□□□□ 0.02
UPF3B-202ENST00000345865 H6PDO95479 791 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 GPIP06744 558 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 SRCP12931 536 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 HMOX2P30519 316 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 SPAM1P38567 509 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 B4GALNT1Q00973 533 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 HMGCS1Q01581 520 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 LSAMPQ13449 338 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 ATP6AP1Q15904 470 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 CMTM8Q8IZV2 173 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 MFSD2AQ8NA29 543 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 OR2AP1Q8NGE2 309 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 FIBINQ8TAL6 211 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 BIRC7Q96CA5 298 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 LMLNQ96KR4 655 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 LSM7Q9UK45 103 aaKnown RBP15.16■□□□□ 0.02
UPF3B-202ENST00000345865 A0A1W2PRU2 124 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 IGSF6O95976 241 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 LHCGRP22888 699 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 HTR1EP28566 365 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 RFC2P35250 354 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 RPL38P63173 70 aaKnown RBP15.16■□□□□ 0.02
UPF3B-202ENST00000345865 ZXDCQ2QGD7 858 aaPredicted RBP15.16■□□□□ 0.02
UPF3B-202ENST00000345865 ITIH5Q86UX2 942 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 CPXM2Q8N436 756 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 FAM47BQ8NA70 645 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 PAPD5Q8NDF8 572 aaKnown RBP15.16■□□□□ 0.02
UPF3B-202ENST00000345865 TSPAN14Q8NG11 270 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 HTATIP2Q9BUP3 242 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 RNF208Q9H0X6 261 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 CAAP1Q9H8G2 361 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 TMEM45AQ9NWC5 275 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 WWOXQ9NZC7 414 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 KIAA1522Q9P206 1035 aaPredicted RBP15.16■□□□□ 0.02
UPF3B-202ENST00000345865 TBX21Q9UL17 535 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 PADI4Q9UM07 663 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 SH3BP1Q9Y3L3 701 aa15.16■□□□□ 0.02
UPF3B-202ENST00000345865 LOC730098B7Z3J9 87 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 ARNTLO00327 626 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 SLC2A4P14672 509 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 HLA-FP30511 346 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 SLC7A9P82251 487 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 PTSQ03393 145 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 ATP13A5Q4VNC0 1218 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 MPPE1Q53F39 396 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 LRRC66Q68CR7 880 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 KRT80Q6KB66 452 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 SPRED1Q7Z699 444 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 CBARPQ8N350 705 aaPredicted RBP15.15■□□□□ 0.02
UPF3B-202ENST00000345865 LYSMD1Q96S90 227 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 SEPHS2Q99611 448 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 MUC13Q9H3R2 512 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 OPTCQ9UBM4 332 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 NPPAP01160 153 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 JAK1P23458 1154 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 SERPINA4P29622 427 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 GPR33Q49SQ1 333 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 LRRC73Q5JTD7 316 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 MPP7Q5T2T1 576 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 ASTLQ6HA08 431 aaPredicted RBP15.15■□□□□ 0.02
UPF3B-202ENST00000345865 GRAMD4Q6IC98 578 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 SULT1C3Q6IMI6 304 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 DTWD1Q8N5C7 304 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 PACRGLQ8N7B6 248 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 MRPS31Q92665 395 aaKnown RBP15.15■□□□□ 0.02
UPF3B-202ENST00000345865 TMIGD2Q96BF3 282 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 CGREF1Q99674 301 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 C19orf43Q9BQ61 176 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 LATS2Q9NRM7 1088 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 PNPLA3Q9NST1 481 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 VAPAQ9P0L0 249 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 KLQ9UEF7 1012 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 ANAPC2Q9UJX6 822 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 CCL26Q9Y258 94 aa15.15■□□□□ 0.02
UPF3B-202ENST00000345865 LTBP2Q14767 1821 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 LEFTY2O00292 366 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 EI24O14681 340 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 CLIC3O95833 236 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 EPORP19235 508 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 ITGB8P26012 769 aa15.14■□□□□ 0.01
UPF3B-202ENST00000345865 VARSP26640 1264 aaKnown RBP15.14■□□□□ 0.01
UPF3B-202ENST00000345865 CA8P35219 290 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms