RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 INMT-MINDY4F8WBC2 141 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 AKAP8O43823 692 aaKnown RBP11.93□□□□□ -0.5
COL12A1-202ENST00000345356 MYCP01106 439 aaPredicted RBP11.93□□□□□ -0.5
COL12A1-202ENST00000345356 TGFB3P10600 412 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 NPR2P20594 1047 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 IMPDH1P20839 514 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 PTPN3P26045 913 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 LCN1P31025 176 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 ADAM15Q13444 863 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 C6orf141Q5SZD1 244 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 SYVN1Q86TM6 617 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 TMIEQ8NEW7 156 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 ABHD11Q8NFV4 315 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 RAD51AP1Q96B01 352 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 BCL2L14Q9BZR8 327 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 TP63Q9H3D4 680 aaPredicted RBP11.93□□□□□ -0.5
COL12A1-202ENST00000345356 AAASQ9NRG9 546 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 FAM86C2PA6NEL3 165 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 DNAJB5O75953 348 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 IFNA6P05013 189 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 F8A1P23610 371 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 S100A2P29034 98 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 OPRL1P41146 370 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 BAG6P46379 1132 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 HSPA7P48741 367 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 AIF1P55008 147 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 GTF2H2Q13888 395 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 OR2T5Q6IEZ7 315 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 GTF2H2CQ6P1K8 395 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 SRFBP1Q8NEF9 429 aaKnown RBP11.93□□□□□ -0.5
COL12A1-202ENST00000345356 OR2T29Q8NH02 315 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 IL31RAQ8NI17 732 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 CEP76Q8TAP6 659 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 ESAMQ96AP7 390 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 EXOC2Q96KP1 924 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 MROH8Q9H579 483 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 NR2E3Q9Y5X4 410 aa11.93□□□□□ -0.5
COL12A1-202ENST00000345356 CLDN5O00501 218 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 SOCS2O14508 198 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 GNAO1P09471 354 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 MAN2A2P49641 1150 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 KLHL22Q53GT1 634 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 C16orf59Q7L2K0 433 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 FAM98AQ8NCA5 519 aaKnown RBP11.92□□□□□ -0.5
COL12A1-202ENST00000345356 RFKQ969G6 155 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 LGALS12Q96DT0 336 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 VMP1Q96GC9 406 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 SENP8Q96LD8 212 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 ELAC1Q9H777 363 aaKnown RBP11.92□□□□□ -0.5
COL12A1-202ENST00000345356 C1orf109Q9NX04 203 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 NUAK1O60285 661 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 HNRNPFP52597 415 aaKnown RBP11.92□□□□□ -0.5
COL12A1-202ENST00000345356 PPP5CP53041 499 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 HERVK_113P63132 956 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 GPR162Q16538 588 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 GNASQ5JWF2 1037 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 ARMC6Q6NXE6 501 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 FBXO42Q6P3S6 717 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 TIGD4Q8IY51 512 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 GLB1L3Q8NCI6 653 aaPredicted RBP11.92□□□□□ -0.5
COL12A1-202ENST00000345356 COQ8AQ8NI60 647 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 COL26A1Q96A83 441 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 PGLYRP2Q96PD5 576 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 IL4I1Q96RQ9 567 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 ERVK-6Q9BXR3 956 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 ZFYVE1Q9HBF4 777 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 CNOT11Q9UKZ1 510 aaKnown RBP11.92□□□□□ -0.5
COL12A1-202ENST00000345356 LRRIQ1Q96JM4 1722 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 C2CD4BA6NLJ0 364 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 A8MT66 165 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 H3BRB1 525 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 SCAMP3O14828 347 aaKnown RBP11.92□□□□□ -0.5
COL12A1-202ENST00000345356 ADAMTS3O15072 1205 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 CILPO75339 1184 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 IGSF6O95976 241 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 EGFRP00533 1210 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 IL1R2P27930 398 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 TSPAN5P62079 268 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 BIKQ13323 160 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 ZBTB6Q15916 424 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 TBC1D25Q3MII6 688 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 RAB12Q6IQ22 244 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 TIFABQ6ZNK6 161 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 SLC51AQ86UW1 340 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 IGDCC3Q8IVU1 814 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 SLC15A3Q8IY34 581 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 PM20D2Q8IYS1 436 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 FBXO27Q8NI29 283 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 CNIH3Q8TBE1 160 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 DEFB129Q9H1M3 183 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 TUT1Q9H6E5 874 aaKnown RBP11.92□□□□□ -0.5
COL12A1-202ENST00000345356 NUDT4Q9NZJ9 180 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 CEPT1Q9Y6K0 416 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 COQ9O75208 318 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 POMCP01189 267 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 CES1P23141 567 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 ULK3Q6PHR2 472 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 MMAAQ8IVH4 418 aaKnown RBP11.92□□□□□ -0.5
COL12A1-202ENST00000345356 ZFPM1Q8IX07 1006 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 AARSD1Q9BTE6 412 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms