RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ASB8Q9H765 288 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 FAM8A1Q9UBU6 413 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 TBC1D29Q9UFV1 150 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 APPL1Q9UKG1 709 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 FBXO5Q9UKT4 447 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 TMPRSS11EQ9UL52 423 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 SATB2Q9UPW6 733 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 RAXQ9Y2V3 346 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 ENTPD2Q9Y5L3 495 aa13.55□□□□□ -0.24
TPM4-202ENST00000344824 GOLGA6L10A6NI86 522 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 SRRM3A6NNA2 597 aaPredicted RBP13.54□□□□□ -0.24
TPM4-202ENST00000344824 H7C0S8 307 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 VEGFDO43915 354 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 ZNF7P17097 686 aaPredicted RBP13.54□□□□□ -0.24
TPM4-202ENST00000344824 PSMA3P25788 255 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 CA5AP35218 305 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 MAPK9P45984 424 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 PDX1P52945 283 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 CACNG1Q06432 222 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 NFATC2Q13469 925 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 NAB1Q13506 487 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 BMPR2Q13873 1038 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 LDLRAP1Q5SW96 308 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 PHF19Q5T6S3 580 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 GPRC6AQ5T6X5 926 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 MRNIPQ6NTE8 343 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 ZNF449Q6P9G9 518 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 PACS1Q6VY07 963 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 B3GNT8Q7Z7M8 397 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 SLC26A11Q86WA9 606 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 PIANPQ8IYJ0 282 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 GOLGA6L1Q8N7Z2 621 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 GABPB2Q8TAK5 448 aaPredicted RBP13.54□□□□□ -0.24
TPM4-202ENST00000344824 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 DCAKDQ8WVC6 231 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.54□□□□□ -0.24
TPM4-202ENST00000344824 ROPN1BQ9BZX4 212 aaPredicted RBP13.54□□□□□ -0.24
TPM4-202ENST00000344824 ROPN1Q9HAT0 212 aaPredicted RBP13.54□□□□□ -0.24
TPM4-202ENST00000344824 RDH14Q9HBH5 336 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 PRDM8Q9NQV8 689 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 WDR70Q9NW82 654 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 PSMC3IPQ9P2W1 217 aaPredicted RBP13.54□□□□□ -0.24
TPM4-202ENST00000344824 SLC24A2Q9UI40 661 aa13.54□□□□□ -0.24
TPM4-202ENST00000344824 ZZEF1O43149 2961 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 DSPP15924 2871 aaKnown RBP13.53□□□□□ -0.24
TPM4-202ENST00000344824 FOXO6A8MYZ6 492 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 GPR89AB7ZAQ6 455 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 NTN3O00634 580 aaPredicted RBP13.53□□□□□ -0.24
TPM4-202ENST00000344824 RGS16O15492 202 aaPredicted RBP13.53□□□□□ -0.24
TPM4-202ENST00000344824 ZW10O43264 779 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 ATP8B1O43520 1251 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 MYZAPP0CAP1 466 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 GPR89BP0CG08 455 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 SLC2A4P14672 509 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 VCLP18206 1134 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 RPL10P27635 214 aaKnown RBP13.53□□□□□ -0.24
TPM4-202ENST00000344824 GP5P40197 560 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 CTSCP53634 463 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 INHBCP55103 352 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 HHEXQ03014 270 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 ZNF789Q5FWF6 425 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 SNX20Q7Z614 316 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 SDCCAG8Q86SQ7 713 aaPredicted RBP13.53□□□□□ -0.24
TPM4-202ENST00000344824 CILP2Q8IUL8 1156 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 CNTN4Q8IWV2 1026 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 TRIM48Q8IWZ4 208 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 CACTIN-AS1Q8N1I8 211 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 C2CD4AQ8NCU7 369 aaPredicted RBP13.53□□□□□ -0.24
TPM4-202ENST00000344824 DDHD1Q8NEL9 900 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 AHCYL2Q96HN2 611 aaKnown RBP13.53□□□□□ -0.24
TPM4-202ENST00000344824 SLC38A3Q99624 504 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 CPNE1Q99829 537 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 NSMCE4AQ9NXX6 385 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 KCNK4Q9NYG8 393 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 CELSR3Q9NYQ7 3312 aa13.53□□□□□ -0.24
TPM4-202ENST00000344824 CCDC187A0A096LP49 1063 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 UBA6A0AVT1 1052 aaPredicted RBP13.52□□□□□ -0.25
TPM4-202ENST00000344824 PMS2P1A4D2B8 440 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 TAF4O00268 1085 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 CHUKO15111 745 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 PPM1DO15297 605 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 CDH16O75309 829 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 NDUFS3O75489 264 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 F3P13726 295 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 PNLIPP16233 465 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 OGNP20774 298 aaKnown RBP13.52□□□□□ -0.25
TPM4-202ENST00000344824 MROH9Q5TGP6 573 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 NKAIN2Q5VXU1 208 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 CNSTQ6PJW8 725 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 TMEM220Q6QAJ8 160 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 ADGRD1Q6QNK2 874 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 USP53Q70EK8 1073 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 SLC9B2Q86UD5 537 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 SERPINA9Q86WD7 417 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 ZNF547Q8IVP9 402 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 CYP4X1Q8N118 509 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 SFRP1Q8N474 314 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 GPR150Q8NGU9 434 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 DCUN1D1Q96GG9 259 aa13.52□□□□□ -0.25
TPM4-202ENST00000344824 TMEM74Q96NL1 305 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms