RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 NPHP4O75161 1426 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 BORCS7-ASMTA0A0B4J1R7 106 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ENTPD5O75356 428 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 HTR3BO95264 441 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ANXA8P13928 327 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CPN2P22792 545 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TCTAP57738 103 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TPI1P60174 286 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 IL5RAQ01344 420 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PNOCQ13519 176 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ANXA8L1Q5VT79 327 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 NAXEQ8NCW5 288 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SMG8Q8ND04 991 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MCUQ8NE86 351 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 OR10T2Q8NGX3 314 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GGHQ92820 318 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CLIP3Q96DZ5 547 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 C14orf105Q9NVL8 296 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 POLHQ9Y253 713 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MROH6A6NGR9 719 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SNRPB2P08579 225 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 RRP1BQ14684 758 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MESDQ14696 234 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 DPYSL2Q16555 572 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 RFTN2Q52LD8 501 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 UNC5AQ6ZN44 842 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 VTCN1Q7Z7D3 282 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 HASPINQ8TF76 798 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ROPN1LQ96C74 230 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CENPNQ96H22 339 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GMCL1Q96IK5 515 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 IFT80Q9P2H3 777 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 LNP1A1A4G5 178 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GNAO1P09471 354 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 EIF2AK2P19525 551 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CHRNA5P30532 468 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CXCR5P32302 372 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 HTR2BP41595 481 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CCR4P51679 360 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SPCS3P61009 180 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 DOC2AQ14183 400 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF234Q14588 700 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FUNDC1Q8IVP5 155 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 OR8S1Q8NH09 359 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CATSPERBQ9H7T0 1116 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SRA1Q9HD15 236 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 A8MV72 311 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 C9P02748 559 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SPRP35270 261 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 RPL14P50914 215 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FOXM1Q08050 763 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 LYRM7Q5U5X0 104 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PNCKQ6P2M8 343 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SH2D3AQ9BRG2 576 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 LHX5Q9H2C1 402 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 IKZF4Q9H2S9 585 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MYNNQ9NPC7 610 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GDAQ9Y2T3 454 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 KIAA0586Q9BVV6 1533 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 DCCP43146 1447 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 EIF4G3O43432 1585 aaKnown RBP3.71□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF729A6NN14 1252 aaPredicted RBP3.71□□□□□ -1.81
SYNE2-202ENST00000344113 ALPIP09923 528 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 IFI30P13284 250 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 CTPS1P17812 591 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 GABRR1P24046 479 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 OR51A7Q8NH64 312 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 OR10A6Q8NH74 314 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 METTL9Q9H1A3 318 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 PCDHGA9Q9Y5G4 932 aaKnown RBP3.71□□□□□ -1.81
SYNE2-202ENST00000344113 PDCD5O14737 125 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 MSI1O43347 362 aaKnown RBP3.71□□□□□ -1.81
SYNE2-202ENST00000344113 FARS2O95363 451 aaKnown RBP3.71□□□□□ -1.81
SYNE2-202ENST00000344113 PFKMP08237 780 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 RPS3P23396 243 aaKnown RBP eCLIP3.71□□□□□ -1.81
SYNE2-202ENST00000344113 DNASE1P24855 282 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 MMP12P39900 470 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 G2E3Q7L622 706 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 VGLL2Q8N8G2 317 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 CEP76Q8TAP6 659 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 SHC3Q92529 594 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 OXNAD1Q96HP4 312 aaPredicted RBP3.71□□□□□ -1.81
SYNE2-202ENST00000344113 CYP2S1Q96SQ9 504 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 INPP5KQ9BT40 448 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 PCDHA3Q9Y5H8 950 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 SALL3Q9BXA9 1300 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 PMM2O15305 246 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 BPGMP07738 259 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM253P0C7T8 217 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 HPGDP15428 266 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 NFKB1P19838 968 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 CLCNKAP51800 687 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF169Q14929 603 aaPredicted RBP3.71□□□□□ -1.81
SYNE2-202ENST00000344113 PEA15Q15121 130 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 DLGAP5Q15398 846 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 TIGD2Q4W5G0 525 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 USP45Q70EL2 814 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 PAGE2Q7Z2X7 111 aa3.71□□□□□ -1.81
SYNE2-202ENST00000344113 PARGQ86W56 976 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms