RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PTBP2Q9UKA9 531 aaKnown RBP18.27■□□□□ 0.51
HOXA9-201ENST00000343483 ITM2BQ9Y287 266 aa18.27■□□□□ 0.51
HOXA9-201ENST00000343483 VCANP13611 3396 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 TAPBPO15533 448 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 VPS4BO75351 444 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 LINGO3P0C6S8 592 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 ELFN1P0C7U0 828 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 CBSLP0DN79 551 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 TCN1P20061 433 aaPredicted RBP18.26■□□□□ 0.51
HOXA9-201ENST00000343483 CBSP35520 551 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 ATXN3P54252 364 aaPredicted RBP18.26■□□□□ 0.51
HOXA9-201ENST00000343483 AQP4P55087 323 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 DCDC1P59894 354 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 RALGDSQ12967 914 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 LRP8Q14114 963 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 BOP1Q14137 746 aaKnown RBP18.26■□□□□ 0.51
HOXA9-201ENST00000343483 ERAP2Q6P179 960 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 DPPA4Q7L190 304 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 GUCD1Q96NT3 240 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 SLC25A23Q9BV35 468 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 SMOXQ9NWM0 555 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 SARDHQ9UL12 918 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 KATNA1O75449 491 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 GPX3P22352 226 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 MMP12P39900 470 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 GDF5P43026 501 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 METAP1P53582 386 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 KCNC3Q14003 757 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 GAB4Q2WGN9 574 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 GRAMD1BQ3KR37 738 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 MBOAT1Q6ZNC8 495 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 SFTPA1Q8IWL2 248 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 FAM156AQ8NDB6 213 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 IPPKQ9H8X2 491 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 THG1LQ9NWX6 298 aaKnown RBP18.26■□□□□ 0.51
HOXA9-201ENST00000343483 ANGPTL3Q9Y5C1 460 aa18.26■□□□□ 0.51
HOXA9-201ENST00000343483 NUP210Q8TEM1 1887 aaPredicted RBP18.26■□□□□ 0.51
HOXA9-201ENST00000343483 A0A0C4DFX4 3053 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 CFAP99D6REC4 459 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 E7ENX8 843 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 OR7A17O14581 309 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 ACOT8O14734 319 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 PEX1O43933 1283 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 AOAHP28039 575 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 ACADVLP49748 655 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 CREB5Q02930 508 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 ACOX1Q15067 660 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 RPS6KA2Q15349 733 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 ZNF284Q2VY69 593 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 HENMT1Q5T8I9 393 aaKnown RBP18.25■□□□□ 0.51
HOXA9-201ENST00000343483 OGFRL1Q5TC84 451 aaPredicted RBP18.25■□□□□ 0.51
HOXA9-201ENST00000343483 NAIF1Q69YI7 327 aaPredicted RBP18.25■□□□□ 0.51
HOXA9-201ENST00000343483 SULT1C3Q6IMI6 304 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 SERPINA13PQ6UXR4 307 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 MIER2Q8N344 545 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 METTL6Q8TCB7 284 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 RHBDF1Q96CC6 855 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 FAM83CQ9BQN1 747 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 WRAP53Q9BUR4 548 aaKnown RBP18.25■□□□□ 0.51
HOXA9-201ENST00000343483 MRPL40Q9NQ50 206 aaKnown RBP18.25■□□□□ 0.51
HOXA9-201ENST00000343483 GDE1Q9NZC3 331 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 KLHL42Q9P2K6 505 aa18.25■□□□□ 0.51
HOXA9-201ENST00000343483 FADS2P1A8MWK0 482 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 MRASO14807 208 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 OTCP00480 354 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 PRNPP04156 253 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 CAPN1P07384 714 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 MSH3P20585 1137 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 PAX7P23759 505 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 XKR7Q5GH72 579 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 ZNF648Q5T619 568 aaPredicted RBP18.24■□□□□ 0.51
HOXA9-201ENST00000343483 TRAM1L1Q8N609 369 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 OR4F6Q8NGB9 312 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 HCAR2Q8TDS4 363 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 LRGUKQ96M69 825 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 TMEM79Q9BSE2 394 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 ZSCAN5AQ9BUG6 496 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 CD244Q9BZW8 370 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 PFDN4Q9NQP4 134 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 RAD18Q9NS91 495 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 DZANK1Q9NVP4 752 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 OPTCQ9UBM4 332 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 DTNAQ9Y4J8 743 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 NR5A2O00482 541 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 NRP2O60462 931 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 PAPLNO95428 1278 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 LYNP07948 512 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 UQCRBP14927 111 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 PSMD8P48556 350 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 TANGO2Q6ICL3 276 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 LIPIQ6XZB0 460 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 SPATA24Q86W54 205 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 FUNDC1Q8IVP5 155 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 OR2T11Q8NH01 316 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 ASB9Q96DX5 294 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 HPS4Q9NQG7 708 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 ARL15Q9NXU5 204 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 SUN2Q9UH99 717 aa18.24■□□□□ 0.51
HOXA9-201ENST00000343483 OR2AG2A6NM03 316 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 C9JVG2 144 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms