RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TMPRSS4Q9NRS4 437 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 COX16Q9P0S2 106 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 PADI3Q9ULW8 664 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 MAFFQ9ULX9 164 aa11.68□□□□□ -0.54
RTN3-203ENST00000341307 MAGED2Q9UNF1 606 aaPredicted RBP11.68□□□□□ -0.54
RTN3-203ENST00000341307 AQP12BA6NM10 295 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 H3BQ06 376 aaPredicted RBP11.67□□□□□ -0.54
RTN3-203ENST00000341307 APOC4-APOC2K7ER74 178 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 KPNA6O60684 536 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 APOC2P02655 101 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 IFNA16P05015 189 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 PGRP06401 933 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 CNTFP26441 200 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 LRPAP1P30533 357 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 RFC2P35250 354 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 RPL14P50914 215 aaKnown RBP11.67□□□□□ -0.54
RTN3-203ENST00000341307 SLC12A2P55011 1212 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 DEFA1P59665 94 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 DEFA3P59666 94 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 SNRPD2P62316 118 aaKnown RBP11.67□□□□□ -0.54
RTN3-203ENST00000341307 STARD3Q14849 445 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 LRRC26Q2I0M4 334 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 ZNF404Q494X3 552 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 FAM209BQ5JX69 171 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 LIMS2Q7Z4I7 341 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 CDH24Q86UP0 819 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 PLCZ1Q86YW0 608 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 AQP12AQ8IXF9 295 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 NETO2Q8NC67 525 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 CDC26Q8NHZ8 85 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 ELMO1Q92556 727 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 FAM149B1Q96BN6 582 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 PAWRQ96IZ0 340 aaKnown RBP11.67□□□□□ -0.54
RTN3-203ENST00000341307 SENP8Q96LD8 212 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 ZNF578Q96N58 590 aaPredicted RBP11.67□□□□□ -0.54
RTN3-203ENST00000341307 MMP27Q9H306 513 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 RSAD1Q9HA92 442 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 NUFIP1Q9UHK0 495 aaKnown RBP11.67□□□□□ -0.54
RTN3-203ENST00000341307 TBC1D24Q9ULP9 559 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 SCML1Q9UN30 329 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 CDYLQ9Y232 598 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 SNX5Q9Y5X3 404 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 CIB4A0PJX0 185 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 MEIOCA2RUB1 952 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 CCDC154A6NI56 674 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 ZNF487B1APH4 448 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 ENDOD1O94919 500 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 LTFP02788 710 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 THP07101 528 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 ACADMP11310 421 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 TGM2P21980 687 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 PSMA4P25789 261 aaKnown RBP11.67□□□□□ -0.54
RTN3-203ENST00000341307 TEKQ02763 1124 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 PSMD5Q16401 504 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 VARS2Q5ST30 1063 aaKnown RBP11.67□□□□□ -0.54
RTN3-203ENST00000341307 SMYD5Q6GMV2 418 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 TAGAPQ8N103 731 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 PLD6Q8N2A8 252 aaKnown RBP11.67□□□□□ -0.54
RTN3-203ENST00000341307 AADATQ8N5Z0 425 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 PQLC3Q8N755 202 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 FNDC5Q8NAU1 212 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 TRPV3Q8NET8 790 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 OR52H1Q8NGJ2 320 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 LRRC39Q96DD0 335 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 LGALS12Q96DT0 336 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 NODALQ96S42 347 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 SDHCQ99643 169 aaPredicted RBP11.67□□□□□ -0.54
RTN3-203ENST00000341307 HDHD5Q9BXW7 423 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 CRTAC1Q9NQ79 661 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 EHD3Q9NZN3 535 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 FAM8A1Q9UBU6 413 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 ADGRE2Q9UHX3 823 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 ZDHHC2Q9UIJ5 367 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 TRMT6Q9UJA5 497 aaKnown RBP11.67□□□□□ -0.54
RTN3-203ENST00000341307 PCDHGB6Q9Y5F9 930 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 CEP290O15078 2479 aa11.67□□□□□ -0.54
RTN3-203ENST00000341307 A0A0U1RQS6 177 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 MYBPHLA2RUH7 354 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 F8W810 466 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 DPYSL4O14531 572 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 ITGA2P17301 1181 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 TFEBP19484 476 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 ALAS2P22557 587 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 ERP29P30040 261 aaKnown RBP11.66□□□□□ -0.54
RTN3-203ENST00000341307 IL12RB1P42701 662 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 ZNF45Q02386 682 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 TNK1Q13470 666 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 INPP5AQ14642 412 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 BRAT1Q6PJG6 821 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 ZNF704Q6ZNC4 412 aaPredicted RBP11.66□□□□□ -0.54
RTN3-203ENST00000341307 PYROXD2Q8N2H3 581 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 TOP6BLQ8N6T0 577 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 PLD5Q8N7P1 536 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 ZMIZ2Q8NF64 920 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 PCDH19Q8TAB3 1148 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 ZHX1-C8orf76Q96EF9 292 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 ELMO2Q96JJ3 720 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 TNIP3Q96KP6 325 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 RNF157Q96PX1 679 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 MED10Q9BTT4 135 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms