RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 PANX2Q96RD6 677 aa18.94■□□□□ 0.62
ITGA4-202ENST00000339307 RUFY1Q96T51 708 aa18.94■□□□□ 0.62
ITGA4-202ENST00000339307 TUBB2BQ9BVA1 445 aa18.94■□□□□ 0.62
ITGA4-202ENST00000339307 SRMSQ9H3Y6 488 aa18.94■□□□□ 0.62
ITGA4-202ENST00000339307 AKIRIN1Q9H9L7 192 aaPredicted RBP18.94■□□□□ 0.62
ITGA4-202ENST00000339307 KCND1Q9NSA2 647 aa18.94■□□□□ 0.62
ITGA4-202ENST00000339307 SEMA5BQ9P283 1151 aa18.94■□□□□ 0.62
ITGA4-202ENST00000339307 HEBP2Q9Y5Z4 205 aa18.94■□□□□ 0.62
ITGA4-202ENST00000339307 GOLGA6L9A6NEM1 432 aa18.93■□□□□ 0.62
ITGA4-202ENST00000339307 C21orf140B9A014 251 aa18.93■□□□□ 0.62
ITGA4-202ENST00000339307 IFRD1O00458 451 aaPredicted RBP18.93■□□□□ 0.62
ITGA4-202ENST00000339307 TPH1P17752 444 aa18.93■□□□□ 0.62
ITGA4-202ENST00000339307 KPNA2P52292 529 aaKnown RBP18.93■□□□□ 0.62
ITGA4-202ENST00000339307 RPS18P62269 152 aaKnown RBP18.93■□□□□ 0.62
ITGA4-202ENST00000339307 D2HGDHQ8N465 521 aa18.93■□□□□ 0.62
ITGA4-202ENST00000339307 TAB3Q8N5C8 712 aaPredicted RBP18.93■□□□□ 0.62
ITGA4-202ENST00000339307 TEX19Q8NA77 164 aa18.93■□□□□ 0.62
ITGA4-202ENST00000339307 ACRBPQ8NEB7 543 aa18.93■□□□□ 0.62
ITGA4-202ENST00000339307 HEXDCQ8WVB3 486 aa18.93■□□□□ 0.62
ITGA4-202ENST00000339307 DNAJC1Q96KC8 554 aaKnown RBP18.93■□□□□ 0.62
ITGA4-202ENST00000339307 LINC00615Q96LM1 132 aaPredicted RBP18.93■□□□□ 0.62
ITGA4-202ENST00000339307 FCRL4Q96PJ5 515 aa18.93■□□□□ 0.62
ITGA4-202ENST00000339307 ALS2CR12Q96Q35 445 aa18.93■□□□□ 0.62
ITGA4-202ENST00000339307 TLR10Q9BXR5 811 aa18.93■□□□□ 0.62
ITGA4-202ENST00000339307 FANCEQ9HB96 536 aa18.93■□□□□ 0.62
ITGA4-202ENST00000339307 SLC9B1P1A6NJY1 282 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 CPNE3O75131 537 aaKnown RBP18.92■□□□□ 0.62
ITGA4-202ENST00000339307 RFPL1O75677 317 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 PTPN7P35236 360 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 PRLHRP49683 370 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 CDKN1CP49918 316 aaPredicted RBP18.92■□□□□ 0.62
ITGA4-202ENST00000339307 ZNF75DP51815 510 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 ZNF140P52738 457 aaPredicted RBP18.92■□□□□ 0.62
ITGA4-202ENST00000339307 KLRB1Q12918 225 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 ASB18Q6ZVZ8 466 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 PEX26Q7Z412 305 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 FAM71DQ8N9W8 422 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 ALG3Q92685 438 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 MRFAP1L1Q96HT8 127 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 LACRTQ9GZZ8 138 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 VPS37BQ9H9H4 285 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 ZDHHC3Q9NYG2 299 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 TLK1Q9UKI8 766 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 AMFRQ9UKV5 643 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 PCDHGA6Q9Y5G7 932 aa18.92■□□□□ 0.62
ITGA4-202ENST00000339307 K7EM74 188 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 MAP3K7O43318 606 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 SGTAO43765 313 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 KLK3P07288 261 aaPredicted RBP18.91■□□□□ 0.62
ITGA4-202ENST00000339307 PTPN4P29074 926 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 CAPRIN2Q6IMN6 1127 aaKnown RBP18.91■□□□□ 0.62
ITGA4-202ENST00000339307 DENND5AQ6IQ26 1287 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 RAD9BQ6WBX8 426 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 MICALCLQ6ZW33 695 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 SERPINA9Q86WD7 417 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 UBL4BQ8N7F7 174 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 PHC3Q8NDX5 983 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 ACVR1CQ8NER5 493 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 CLIP3Q96DZ5 547 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 GPR87Q9BY21 358 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 SLC7A5P2Q9GIP4 190 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 PIH1D1Q9NWS0 290 aaKnown RBP18.91■□□□□ 0.62
ITGA4-202ENST00000339307 FEZ2Q9UHY8 353 aaPredicted RBP18.91■□□□□ 0.62
ITGA4-202ENST00000339307 PACSIN2Q9UNF0 486 aaPredicted RBP18.91■□□□□ 0.62
ITGA4-202ENST00000339307 CCDC78A2IDD5 438 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 GRID2IPA4D2P6 1211 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 LDB2O43679 373 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 DNAJB5O75953 348 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 PRSS56P0CW18 603 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 POU6F1Q14863 301 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 PARP6Q2NL67 630 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 GPR33Q49SQ1 333 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 PRAMEF17Q5VTA0 474 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 OR8K5Q8NH50 307 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 SEC14L1Q92503 715 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 ZNF501Q96CX3 271 aaPredicted RBP18.91■□□□□ 0.62
ITGA4-202ENST00000339307 COG4Q9H9E3 785 aa18.91■□□□□ 0.62
ITGA4-202ENST00000339307 FARSAQ9Y285 508 aaKnown RBP18.91■□□□□ 0.62
ITGA4-202ENST00000339307 REXO2Q9Y3B8 237 aaKnown RBP18.91■□□□□ 0.62
ITGA4-202ENST00000339307 C17orf113A0A1B0GUU1 675 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 AGAP14A8MT82 685 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 ZNF189O75820 626 aaPredicted RBP18.9■□□□□ 0.62
ITGA4-202ENST00000339307 ACRV1P26436 265 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 PREPP48147 710 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 VAV2P52735 878 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 PMS2P54278 862 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 PRKG2Q13237 762 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 MSLNQ13421 630 aaPredicted RBP18.9■□□□□ 0.62
ITGA4-202ENST00000339307 TCTN3Q6NUS6 607 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 HOOK3Q86VS8 718 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 CLDN19Q8N6F1 224 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 TTC13Q8NBP0 860 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 COL26A1Q96A83 441 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 HGH1Q9BTY7 390 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 KLHL25Q9H0H3 589 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 LRRC40Q9H9A6 602 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 ARNT2Q9HBZ2 717 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 SMARCAL1Q9NZC9 954 aa18.9■□□□□ 0.62
ITGA4-202ENST00000339307 BSNQ9UPA5 3926 aa18.89■□□□□ 0.61
ITGA4-202ENST00000339307 ARGFXA6NJG6 315 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms