RNA–Protein interactions for RNA: ENST00000339140.4

FOXR2-201, Transcript of forkhead box R2, humanhuman

APPRIS P1 BASIC

Gene FOXR2, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2-201ENST00000339140 B3GNT8Q7Z7M8 397 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 MICU2Q8IYU8 434 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 CLIP4Q8N3C7 705 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 ZNF540Q8NDQ6 660 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 ZNF548Q8NEK5 533 aaPredicted RBP8.9□□□□□ -0.98
FOXR2-201ENST00000339140 DNAJB8Q8NHS0 232 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 CNIH3Q8TBE1 160 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 SLC38A4Q969I6 547 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 IMP4Q96G21 291 aaKnown RBP8.9□□□□□ -0.98
FOXR2-201ENST00000339140 HHIPL1Q96JK4 782 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 AGAP4Q96P64 663 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 CLSTN3Q9BQT9 956 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 ITPAQ9BY32 194 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 SLC39A8Q9C0K1 460 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 GABARAPL1Q9H0R8 117 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 SMOC2Q9H3U7 446 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 OSER1Q9NX31 292 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.9□□□□□ -0.98
FOXR2-201ENST00000339140 CCDC59Q9P031 241 aaKnown RBP8.9□□□□□ -0.98
FOXR2-201ENST00000339140 RAPGEFL1Q9UHV5 662 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 NUDT5Q9UKK9 219 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 CRYL1Q9Y2S2 319 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 TIMM22Q9Y584 194 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 SNX10Q9Y5X0 201 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 PTCH2Q9Y6C5 1203 aa8.9□□□□□ -0.98
FOXR2-201ENST00000339140 SMIM28A0A1B0GU29 152 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 LRRC14BA6NHZ5 514 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 A8MU76 341 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 PDZK1P1A8MUH7 402 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 CXCR6O00574 342 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 FTH1P02794 183 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 HOXA11P31270 313 aaPredicted RBP8.9□□□□□ -0.99
FOXR2-201ENST00000339140 PPP3CCP48454 512 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 IST1P53990 364 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 LILRA4P59901 499 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 ACVR1Q04771 509 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 CHRNEQ04844 493 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 RBBP7Q16576 425 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 UBE2UQ5VVX9 321 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 DESI1Q6ICB0 168 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 ENPP6Q6UWR7 440 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 GPRIN3Q6ZVF9 776 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 GPR149Q86SP6 731 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 OSTM1Q86WC4 334 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 NKAPQ8N5F7 415 aaKnown RBP8.9□□□□□ -0.99
FOXR2-201ENST00000339140 ASCC1Q8N9N2 400 aaKnown RBP8.9□□□□□ -0.99
FOXR2-201ENST00000339140 ZNF784Q8NCA9 323 aaPredicted RBP8.9□□□□□ -0.99
FOXR2-201ENST00000339140 SIMC1Q8NDZ2 872 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 GPRC5AQ8NFJ5 357 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 KBTBD8Q8NFY9 601 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 GRPEL2Q8TAA5 225 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 ZNF419Q96HQ0 510 aaPredicted RBP8.9□□□□□ -0.99
FOXR2-201ENST00000339140 PARK7Q99497 189 aaKnown RBP8.9□□□□□ -0.99
FOXR2-201ENST00000339140 AARSD1Q9BTE6 412 aaKnown RBP8.9□□□□□ -0.99
FOXR2-201ENST00000339140 THUMPD3Q9BV44 507 aaKnown RBP8.9□□□□□ -0.99
FOXR2-201ENST00000339140 EMILIN2Q9BXX0 1053 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 CXCL16Q9H2A7 254 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 DCAF13Q9NV06 445 aaKnown RBP8.9□□□□□ -0.99
FOXR2-201ENST00000339140 TAS2R13Q9NYV9 303 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 OPTCQ9UBM4 332 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 TMEFF2Q9UIK5 374 aaPredicted RBP8.9□□□□□ -0.99
FOXR2-201ENST00000339140 NEU3Q9UQ49 428 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 CARD8Q9Y2G2 431 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 GRIP1Q9Y3R0 1128 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 PEX16Q9Y5Y5 336 aa8.9□□□□□ -0.99
FOXR2-201ENST00000339140 MCM3APO60318 1980 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 OR2A25A4D2G3 310 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 ASB14A6NK59 587 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 LOC110117498-PIK3R3F6TDL0 507 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 AIREO43918 545 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 KLK8O60259 260 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 FAM20BO75063 409 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 FADS2O95864 444 aaKnown RBP8.89□□□□□ -0.99
FOXR2-201ENST00000339140 KRT6AP02538 564 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 MT-ND2P03891 347 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 KRT6BP04259 564 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 EFNA1P20827 205 aaPredicted RBP8.89□□□□□ -0.99
FOXR2-201ENST00000339140 CD6P30203 668 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 MAP2K4P45985 399 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 NRIP1P48552 1158 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 LHX1P48742 406 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 SEPHS1P49903 392 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 CYP4F3Q08477 520 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 MAD2L1Q13257 205 aaPredicted RBP8.89□□□□□ -0.99
FOXR2-201ENST00000339140 PROX2Q3B8N5 592 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 XKR4Q5GH76 650 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 COLEC12Q5KU26 742 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 VARS2Q5ST30 1063 aaKnown RBP8.89□□□□□ -0.99
FOXR2-201ENST00000339140 TPRG1LQ5T0D9 272 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 AFMIDQ63HM1 303 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 ZNF549Q6P9A3 640 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 CYP20A1Q6UW02 462 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 CCBE1Q6UXH8 406 aaPredicted RBP8.89□□□□□ -0.99
FOXR2-201ENST00000339140 SYVN1Q86TM6 617 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 TAC4Q86UU9 113 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 TSPYL5Q86VY4 417 aaPredicted RBP8.89□□□□□ -0.99
FOXR2-201ENST00000339140 FBXO16Q8IX29 292 aaPredicted RBP8.89□□□□□ -0.99
FOXR2-201ENST00000339140 NAT16Q8N8M0 369 aa8.89□□□□□ -0.99
FOXR2-201ENST00000339140 GLB1L3Q8NCI6 653 aaPredicted RBP8.89□□□□□ -0.99
FOXR2-201ENST00000339140 PIK3R3Q92569 461 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms