RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 CPNE5Q9HCH3 593 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 BFARQ9NZS9 450 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 AKAP7Q9P0M2 348 aaPredicted RBP14.9□□□□□ -0.02
PRKN-201ENST00000338468 KLHL3Q9UH77 587 aa14.9□□□□□ -0.02
PRKN-201ENST00000338468 B4E171 279 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 AP3B1O00203 1094 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 CAPN5O15484 640 aaPredicted RBP14.89□□□□□ -0.03
PRKN-201ENST00000338468 ANKRD34CP0C6C1 535 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 AMD1P17707 334 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 CSTF2P33240 577 aaKnown RBP eCLIP14.89□□□□□ -0.03
PRKN-201ENST00000338468 TSPAN7P41732 249 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 PRAMEP78395 509 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 LYPLAL1Q5VWZ2 237 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 CREG2Q8IUH2 290 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 AGGF1Q8N302 714 aaeCLIP14.89□□□□□ -0.03
PRKN-201ENST00000338468 ART4Q93070 314 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 MFSD3Q96ES6 412 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 TGM7Q96PF1 710 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 TRIM56Q9BRZ2 755 aaKnown RBP14.89□□□□□ -0.03
PRKN-201ENST00000338468 DPH1Q9BZG8 443 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 B3GNT4Q9C0J1 378 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 RAB33BQ9H082 229 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 DDX47Q9H0S4 455 aaKnown RBP14.89□□□□□ -0.03
PRKN-201ENST00000338468 KIR3DX1Q9H7L2 352 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 EPHA6Q9UF33 1036 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 SLC24A2Q9UI40 661 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 SOX13Q9UN79 622 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 PCDHGA3Q9Y5H0 932 aa14.89□□□□□ -0.03
PRKN-201ENST00000338468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.89□□□□□ -0.03
PRKN-201ENST00000338468 EFCAB7A8K855 629 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 KLK10O43240 276 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 KIF1CO43896 1103 aaKnown RBP14.88□□□□□ -0.03
PRKN-201ENST00000338468 GSTM1P09488 218 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 PTGIRP43119 386 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 MAGEA3P43357 314 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 GSTM4Q03013 218 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 RPA4Q13156 261 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 TGIF1Q15583 401 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 FASTKD1Q53R41 847 aaKnown RBP14.88□□□□□ -0.03
PRKN-201ENST00000338468 NAPRTQ6XQN6 538 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 CERS6Q6ZMG9 384 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 ZFAND4Q86XD8 727 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 NAT8LQ8N9F0 302 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 MCUQ8NE86 351 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 LKAAEAR1Q8TD35 194 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 ZFPM2Q8WW38 1151 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.88□□□□□ -0.033e-8■■■■■ 70.6
PRKN-201ENST00000338468 TAAR9Q96RI9 348 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 NAPGQ99747 312 aaPredicted RBP14.88□□□□□ -0.03
PRKN-201ENST00000338468 NRTNQ99748 197 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 VPS37BQ9H9H4 285 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 CATSPERZQ9NTU4 200 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 SIDT1Q9NXL6 827 aaKnown RBP14.88□□□□□ -0.03
PRKN-201ENST00000338468 B3GALT1Q9Y5Z6 326 aa14.88□□□□□ -0.03
PRKN-201ENST00000338468 SPTA1P02549 2419 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 SDK2Q58EX2 2172 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 GOLGA6L10A0A0M3HER8 536 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 SLC5A10A0PJK1 596 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 B8ZZF3 427 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 BHMG1C9JSJ3 638 aaPredicted RBP14.87□□□□□ -0.03
PRKN-201ENST00000338468 GOLGA8MH3BSY2 632 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 CD3EAPO15446 510 aaKnown RBP14.87□□□□□ -0.03
PRKN-201ENST00000338468 VAPBO95292 243 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 MLNP12872 115 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 ACADLP28330 430 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 ARCN1P48444 511 aaKnown RBP14.87□□□□□ -0.03
PRKN-201ENST00000338468 MC2RQ01718 297 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 RNASEH2BQ5TBB1 312 aaKnown RBP14.87□□□□□ -0.03
PRKN-201ENST00000338468 PRSS42Q7Z5A4 293 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 FAM129CQ86XR2 697 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 DTX1Q86Y01 620 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 C17orf53Q8N3J3 647 aaPredicted RBP14.87□□□□□ -0.03
PRKN-201ENST00000338468 GRK7Q8WTQ7 553 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 ELMO1Q92556 727 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 SLCO2A1Q92959 643 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 CAPZA3Q96KX2 299 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 SERPINB12Q96P63 405 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 DDA1Q9BW61 102 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 APMAPQ9HDC9 416 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 KCND1Q9NSA2 647 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 SLC39A1Q9NY26 324 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 SEMA5BQ9P283 1151 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 PCYOX1Q9UHG3 505 aa14.87□□□□□ -0.03
PRKN-201ENST00000338468 OR5K3A6NET4 321 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 IQCF5A8MTL0 148 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.86□□□□□ -0.03
PRKN-201ENST00000338468 GOLGA8KD6RF30 607 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 GOLGA8TH3BQL2 631 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 QSOX1O00391 747 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 LIN7AO14910 233 aaPredicted RBP14.86□□□□□ -0.03
PRKN-201ENST00000338468 TOX3O15405 576 aaPredicted RBP14.86□□□□□ -0.03
PRKN-201ENST00000338468 EFSO43281 561 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 FTH1P02794 183 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 OR56A5P0C7T3 313 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 ITGB6P18564 788 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 IVDP26440 423 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 CCR7P32248 378 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 CD151P48509 253 aa14.86□□□□□ -0.03
PRKN-201ENST00000338468 SARNPP82979 210 aaKnown RBP14.86□□□□□ -0.03
PRKN-201ENST00000338468 KCNC4Q03721 635 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms