RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 OTUD1Q5VV17 481 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 CBR4Q8N4T8 237 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 BPIFB6Q8NFQ5 453 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 KCNA7Q96RP8 456 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 APOL4Q9BPW4 351 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 CLSTN3Q9BQT9 956 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 MUC13Q9H3R2 512 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 LATS1O95835 1130 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 DDX6P26196 483 aaKnown RBP eCLIP6.19□□□□□ -1.423e-7■■■■□ 22.2
PRKDC-202ENST00000338368 TGM3Q08188 693 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 NCEH1Q6PIU2 408 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 KLHL23Q8NBE8 558 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 SLC32A1Q9H598 525 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 USE1Q9NZ43 259 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 DNAJC15Q9Y5T4 150 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 TP73O15350 636 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF30P17039 623 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 AP1S2P56377 157 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 SLC5A9Q2M3M2 681 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 ATAT1Q5SQI0 421 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 TAS1R1Q7RTX1 841 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 CYP2U1Q7Z449 544 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 LIX1Q8N485 282 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 RORBQ92753 470 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 FAM210AQ96ND0 272 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 TMEM74Q96NL1 305 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 CD244Q9BZW8 370 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 FAM192AQ9GZU8 254 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 SPO11Q9Y5K1 396 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 H0Y858 1186 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 APODP05090 189 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 CKMT2P17540 419 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 PSMB9P28065 219 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 GGT5P36269 586 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 STK19P49842 368 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 TCEAL8Q8IYN2 117 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 CELF5Q8N6W0 485 aaKnown RBP6.19□□□□□ -1.42
PRKDC-202ENST00000338368 SCAMP4Q969E2 229 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 DCUN1D5Q9BTE7 237 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 POLR1BQ9H9Y6 1135 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 TBC1D23Q9NUY8 699 aa6.19□□□□□ -1.42
PRKDC-202ENST00000338368 STX16O14662 325 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 FAM20BO75063 409 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 UMPSP11172 480 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 AQP4P55087 323 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 HTRA3P83110 453 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 PWP1Q13610 501 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 MED27Q6P2C8 311 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 PLD3Q8IV08 490 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 REXO5Q96IC2 774 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 LRRC3Q9BY71 257 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 EBF3Q9H4W6 596 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CLK4Q9HAZ1 481 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 hCG_2014768A0A024R1R8 64 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 DPPA5A6NC42 116 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 LDB2O43679 373 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 DNAJA2O60884 412 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CBSLP0DN79 551 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CBSP35520 551 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 MAGEA3P43357 314 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TRAP1Q12931 704 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 STX19Q8N4C7 294 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 OR10A6Q8NH74 314 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 POP5Q969H6 163 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CENPNQ96H22 339 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 PHPT1Q9NRX4 125 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 TYRP14679 529 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 SLC7A1P30825 629 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 MTPNP58546 118 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 RABL3Q5HYI8 236 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 KLHDC10Q6PID8 442 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 R3HCC1LQ7Z5L2 792 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 IL36AQ9UHA7 158 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 SLC22A14Q9Y267 594 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 LOC285095A0A1B0GVY8 99 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 SOCS5O75159 536 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 SCELO95171 688 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 RHOP08100 348 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 GNAZP19086 355 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 RXRGP48443 463 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 SPIDRQ14159 915 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ANO7Q6IWH7 933 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CHSY3Q70JA7 882 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ISCA2Q86U28 154 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 KRT73Q86Y46 540 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 NXPE1Q8N323 547 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ANKRD49Q8WVL7 239 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 NSUN5Q96P11 429 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CGREF1Q99674 301 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 ZSCAN5AQ9BUG6 496 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 C20orf27Q9GZN8 174 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 CCDC177Q9NQR7 707 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 RAB26Q9ULW5 256 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 COMMD3-BMI1R4GMX3 469 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 DDX60LQ5H9U9 1706 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 G3V2T6 193 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 PGLSO95336 258 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 MT-ND1P03886 318 aa6.18□□□□□ -1.42
PRKDC-202ENST00000338368 RPS9P46781 194 aaKnown RBP6.18□□□□□ -1.42
PRKDC-202ENST00000338368 AGTR2P50052 363 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms