RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RAMP2O60895 175 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 RECQL4O94761 1208 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 S100A9P06702 114 aaKnown RBP13.06□□□□□ -0.32
COL2A1-201ENST00000337299 GSTM2P28161 218 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 EMP3P54852 163 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 RPL6Q02878 288 aaKnown RBP13.06□□□□□ -0.32
COL2A1-201ENST00000337299 CLCA4Q14CN2 919 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 GHDCQ8N2G8 530 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 OR7G1Q8NGA0 311 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 FRS2Q8WU20 508 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 SLC13A3Q8WWT9 602 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 FRMD6Q96NE9 622 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 IL4I1Q96RQ9 567 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 IL12RB2Q99665 862 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 CHIAQ9BZP6 476 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 TTYH1Q9H313 450 aaPredicted RBP13.06□□□□□ -0.32
COL2A1-201ENST00000337299 FAM118AQ9NWS6 357 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 THG1LQ9NWX6 298 aaKnown RBP13.06□□□□□ -0.32
COL2A1-201ENST00000337299 CFL2Q9Y281 166 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 FABP3P05413 133 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 IRF1P10914 325 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 DCKP27707 260 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 FAM117BQ6P1L5 589 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 ITIH5Q86UX2 942 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 CEP97Q8IW35 865 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 AKAP1Q92667 903 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL2A1-201ENST00000337299 C11orf24Q96F05 449 aaPredicted RBP13.06□□□□□ -0.32
COL2A1-201ENST00000337299 AURKBQ96GD4 344 aaPredicted RBP13.06□□□□□ -0.32
COL2A1-201ENST00000337299 ART5Q96L15 291 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 NSUN5Q96P11 429 aaKnown RBP13.06□□□□□ -0.32
COL2A1-201ENST00000337299 MROH8Q9H579 483 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 ZNF490Q9ULM2 529 aaPredicted RBP13.06□□□□□ -0.32
COL2A1-201ENST00000337299 PCDHGA8Q9Y5G5 932 aa13.06□□□□□ -0.32
COL2A1-201ENST00000337299 H0YAE9 185 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 PLD2O14939 933 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 NUPL2O15504 423 aaKnown RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 HCRTO43612 131 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ICMTO60725 284 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 MITFO75030 526 aaPredicted RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ARIH2O95376 493 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 SLC35E2BP0CK96 405 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 OR1E1P30953 314 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 HMGCS1Q01581 520 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 PDE12Q6L8Q7 609 aaKnown RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 GET4Q7L5D6 327 aaPredicted RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ACVR1CQ8NER5 493 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 APOLD1Q96LR9 279 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ATP13A3Q9H7F0 1226 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 EIF2B3Q9NR50 452 aaKnown RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 EIF3KQ9UBQ5 218 aaKnown RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 TNFSF13BQ9Y275 285 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 MYO5AQ9Y4I1 1855 aaKnown RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 CHURC1-FNTBB4DL54 471 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 OR10H3O60404 316 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 KDM4BO94953 1096 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 BMP4P12644 408 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 MYL9P24844 172 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 CDH12P55289 794 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ACSM2AQ08AH3 577 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 TRIM71Q2Q1W2 868 aaKnown RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 TTLL9Q3SXZ7 439 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ACSM2BQ68CK6 577 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ABHD15Q6UXT9 468 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ZZZ3Q8IYH5 903 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 COLGALT2Q8IYK4 626 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 NKAPQ8N5F7 415 aaKnown RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ARFGAP1Q8N6T3 406 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 RAET1EQ8TD07 263 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 SNAPC3Q92966 411 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 MYRFLQ96LU7 910 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ARL15Q9NXU5 204 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 MAPRE3Q9UPY8 281 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 PRRC2BQ5JSZ5 2229 aaKnown RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 RGPD5Q99666 1765 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 TTC24A2A3L6 582 aaPredicted RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 TNFRSF11BO00300 401 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 SCELO95171 688 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 CAPN3P20807 821 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 UGT8Q16880 541 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 DNERQ8NFT8 737 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 POLR3BQ9NW08 1133 aaPredicted RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 PTGFRNQ9P2B2 879 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 EVLQ9UI08 416 aaPredicted RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 SNX6Q9UNH7 406 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 LYVE1Q9Y5Y7 322 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 PLK4O00444 970 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 CXCL11O14625 94 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ORC5O43913 435 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 MAFO75444 373 aaPredicted RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 NPM3O75607 178 aaKnown RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 C1RP00736 705 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 DPP6P42658 865 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 ACLYP53396 1101 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 BTG3Q14201 252 aaPredicted RBP13.05□□□□□ -0.32
COL2A1-201ENST00000337299 NFE2L1Q14494 772 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 SLC36A3Q495N2 470 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 PLEKHH3Q7Z736 793 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 SH3KBP1Q96B97 665 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 LRCH3Q96II8 777 aa13.05□□□□□ -0.32
COL2A1-201ENST00000337299 TRPC4Q9UBN4 977 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms