RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 DBTP11182 482 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 MAGEA10P43363 369 aaPredicted RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 KRT6CP48668 564 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 TUFMP49411 452 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 EPHB3P54753 998 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 ACOX1Q15067 660 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 PCBP1Q15365 356 aaKnown RBP eCLIP8.1□□□□□ -1.11
HPS4-201ENST00000336873 TTLL9Q3SXZ7 439 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 PARP15Q460N3 678 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 AARS2Q5JTZ9 985 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 C8orf59Q8N0T1 100 aaPredicted RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 UBE2J2Q8N2K1 259 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 CLIP4Q8N3C7 705 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 FIBCD1Q8N539 461 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 ZNF540Q8NDQ6 660 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 OR5AK3PQ8NH89 298 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 IRGQQ8WZA9 623 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 BIRC7Q96CA5 298 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 BTBD9Q96Q07 612 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 TSPAN18Q96SJ8 248 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 DPH2Q9BQC3 489 aaPredicted RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 C1QTNF1Q9BXJ1 281 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 KATNBL1Q9H079 304 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 MFSD1Q9H3U5 465 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 CMTM6Q9NX76 183 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 DAPK2Q9UIK4 370 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 RAB26Q9ULW5 256 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 TRBV23OR9-2A0A075B6M9 112 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 GLYATL1P3A0A0U1RQE8 302 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 HHLA1C9JL84 531 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 KDM1AO60341 852 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 MLYCDO95822 493 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 SERPINA1P01009 418 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 ANXA5P08758 320 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 SCNN1AP37088 669 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 LEPRP48357 1165 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 POLD2P49005 469 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 CBX3Q13185 183 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 PCBP2Q15366 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
HPS4-201ENST00000336873 SPDYE7PQ495Y7 208 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 FGD3Q5JSP0 725 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 OR4F3Q6IEY1 312 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 GPR153Q6NV75 609 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 LETMD1Q6P1Q0 360 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 RSPO2Q6UXX9 243 aaPredicted RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 Q6ZVU0 165 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 GVINP1Q7Z2Y8 2422 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 DNAJB7Q7Z6W7 309 aaPredicted RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 ZNF467Q7Z7K2 595 aaPredicted RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 GPR180Q86V85 440 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 EID3Q8N140 333 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 C12orf43Q96C57 262 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 REXO5Q96IC2 774 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 CEP19Q96LK0 163 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 COPS8Q99627 209 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 TDRD1Q9BXT4 1180 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 RNF38Q9H0F5 515 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 NOL6Q9H6R4 1146 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 ABCB10Q9NRK6 738 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 MAP10Q9P2G4 905 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 OGDHLQ9ULD0 1010 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 SAMHD1Q9Y3Z3 626 aaKnown RBP8.1□□□□□ -1.11
HPS4-201ENST00000336873 CABIN1Q9Y6J0 2220 aa8.1□□□□□ -1.11
HPS4-201ENST00000336873 ZNF197O14709 1029 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 RGS14O43566 566 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 STK16O75716 305 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 MYO1DO94832 1006 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 OCM2P0CE71 109 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 OCMP0CE72 109 aaPredicted RBP8.09□□□□□ -1.11
HPS4-201ENST00000336873 TNFRSF1BP20333 461 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 SLC6A2P23975 617 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 NR1D2Q14995 579 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 PHKG1Q16816 387 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 IER5LQ5T953 404 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 UGT2A3Q6UWM9 527 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 AHSA2Q719I0 299 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 FUNDC1Q8IVP5 155 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 APCDD1Q8J025 514 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 METTL25Q8N6Q8 603 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 NT5C3BQ969T7 300 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 CENPNQ96H22 339 aaPredicted RBP8.09□□□□□ -1.11
HPS4-201ENST00000336873 MYO19Q96H55 970 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 PPP1R2P1Q96PQ5 205 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 C2orf49Q9BVC5 232 aaPredicted RBP8.09□□□□□ -1.11
HPS4-201ENST00000336873 HIPK3Q9H422 1215 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 IMPAD1Q9NX62 359 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 MKS1Q9NXB0 559 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 PCDHB8Q9UN66 801 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 DMTF1Q9Y222 760 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 CA12O43570 354 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 LZTS3O60299 673 aaPredicted RBP8.09□□□□□ -1.11
HPS4-201ENST00000336873 FAM20BO75063 409 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 CLDN11O75508 207 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 ANXA6P08133 673 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 PTGER1P34995 402 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 GNPDA1P46926 289 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 ERVPABLB-1P60509 514 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 SCAPQ12770 1279 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 SELPLGQ14242 412 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 USP41Q3LFD5 358 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms