RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 CGREF1Q99674 301 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 ATP13A3Q9H7F0 1226 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 KLQ9UEF7 1012 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 LSM7Q9UK45 103 aaKnown RBP17.4■□□□□ 0.38
LRCH3-201ENST00000334859 CROCCQ5TZA2 2017 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 PIKFYVEQ9Y2I7 2098 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 A0A1B0GVG6 124 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 GRXCR2A6NFK2 248 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 BNIP3LO60238 219 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 JAK1P23458 1154 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 CYP4F8P98187 520 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 GLYATQ6IB77 296 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 TPGS1Q6ZTW0 290 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 TSPAN33Q86UF1 283 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 OFCC1Q8IZS5 231 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 DTWD1Q8N5C7 304 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 MAGEE2Q8TD90 523 aaPredicted RBP17.4■□□□□ 0.38
LRCH3-201ENST00000334859 ZBTB18Q99592 522 aa17.4■□□□□ 0.38
LRCH3-201ENST00000334859 FARSBQ9NSD9 589 aaKnown RBP17.4■□□□□ 0.38
LRCH3-201ENST00000334859 SCN8AQ9UQD0 1980 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 ANKRD28O15084 1053 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 RGS14O43566 566 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 IGSF6O95976 241 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 CXCL10P02778 98 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 SPAM1P38567 509 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 MAPK8P45983 427 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 HMGCS1Q01581 520 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 C11orf91Q3C1V1 193 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 SLC36A3Q495N2 470 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 KCTD21Q4G0X4 260 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 MBOAT1Q6ZNC8 495 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 ULK4Q96C45 1275 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 ZNF558Q96NG5 402 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 CHID1Q9BWS9 393 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 SEZ6LQ9BYH1 1024 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 CD244Q9BZW8 370 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 ZFP14Q9HCL3 533 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 SMPD3Q9NY59 655 aaPredicted RBP17.39■□□□□ 0.37
LRCH3-201ENST00000334859 CLEC4EQ9ULY5 219 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 EIF3LQ9Y262 564 aaKnown RBP17.39■□□□□ 0.37
LRCH3-201ENST00000334859 PCDHB3Q9Y5E6 796 aa17.39■□□□□ 0.37
LRCH3-201ENST00000334859 GFRA2O00451 464 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 CLOCKO15516 846 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 SOCS5O75159 536 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 SLC5A2P31639 672 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 RPS9P46781 194 aaKnown RBP17.38■□□□□ 0.37
LRCH3-201ENST00000334859 TUBA4AP68366 448 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 PWP1Q13610 501 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 RAB33AQ14088 237 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 IMPG1Q17R60 797 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 PYCR3Q53H96 274 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 DNAJC14Q6Y2X3 702 aaPredicted RBP17.38■□□□□ 0.37
LRCH3-201ENST00000334859 LPCAT2Q7L5N7 544 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 ADGRG2Q8IZP9 1017 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 NXPE1Q8N323 547 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 PAPD5Q8NDF8 572 aaKnown RBP17.38■□□□□ 0.37
LRCH3-201ENST00000334859 SLC13A3Q8WWT9 602 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 ACDQ96AP0 544 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 ABCG8Q9H221 673 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 C8orf4Q9NR00 106 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 CFAP97Q9P2B7 532 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 RSL24D1Q9UHA3 163 aaKnown RBP17.38■□□□□ 0.37
LRCH3-201ENST00000334859 TRBV5-4A0A0C4DH59 114 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 NPIPB15A6NHN6 443 aaPredicted RBP17.38■□□□□ 0.37
LRCH3-201ENST00000334859 ARNTLO00327 626 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 KCNH1O95259 989 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 NFKBIAP25963 317 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 PCSK6P29122 969 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 SERPINA4P29622 427 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 CA8P35219 290 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 ALDH3B2P48448 385 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 LMAN2Q12907 356 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 ARHGEF7Q14155 803 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 GPRC6AQ5T6X5 926 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 LYPLAL1Q5VWZ2 237 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 SULT1C3Q6IMI6 304 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 PRR23BQ6ZRT6 265 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 BBS7Q8IWZ6 715 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 RHBDF1Q96CC6 855 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 HTATIP2Q9BUP3 242 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.38■□□□□ 0.37
LRCH3-201ENST00000334859 FADS3Q9Y5Q0 445 aa17.38■□□□□ 0.37
LRCH3-201ENST00000334859 K7EPI3 171 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 IFRD1O00458 451 aaPredicted RBP17.37■□□□□ 0.37
LRCH3-201ENST00000334859 DFNA5O60443 496 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 ULK1O75385 1050 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 GMNNO75496 209 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 ASLP04424 464 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 C7P10643 843 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 CDH1P12830 882 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 MSH3P20585 1137 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 GABRR2P28476 465 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 CD70P32970 193 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 FXNQ16595 210 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 TTLL9Q3SXZ7 439 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 FAM174BQ3ZCQ3 159 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 GRAMD4Q6IC98 578 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 MACC1Q6ZN28 852 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 ZSWIM9Q86XI8 627 aa17.37■□□□□ 0.37
LRCH3-201ENST00000334859 DHRSXQ8N5I4 330 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms