RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 MAPRE3Q9UPY8 281 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 TCRBV9S1A1TA0A576 114 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 ECH1Q13011 328 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 SPDYCQ5MJ68 293 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 DHDDSQ86SQ9 333 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 UNC93AQ86WB7 457 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 ECHDC2Q86YB7 292 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 PSMG2Q969U7 264 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 ZSCAN5AQ9BUG6 496 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 IPPKQ9H8X2 491 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 PLEKHA6Q9Y2H5 1048 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 E7ENX8 843 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 E2F3O00716 465 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 FGF1P05230 155 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 C8AP07357 584 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 PRKCZQ05513 592 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 ILF3Q12906 894 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLN8-201ENST00000331222 C5orf22Q49AR2 442 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 NXPE1Q8N323 547 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 AGAP11Q8TF27 550 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 HNRNPLLQ8WVV9 542 aaKnown RBP10.43□□□□□ -0.74
CLN8-201ENST00000331222 PCED1BQ96HM7 432 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 EBNA1BP2Q99848 306 aaKnown RBP10.43□□□□□ -0.74
CLN8-201ENST00000331222 METTL8Q9H825 291 aaKnown RBP10.43□□□□□ -0.74
CLN8-201ENST00000331222 SYNPO2Q9UMS6 1093 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 SMIM30A4D0T7 59 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 PRR5-ARHGAP8B1AHC4 643 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 CDC123O75794 336 aaPredicted RBP10.43□□□□□ -0.74
CLN8-201ENST00000331222 MECP2P51608 486 aaKnown RBP10.43□□□□□ -0.74
CLN8-201ENST00000331222 ELF3P78545 371 aaPredicted RBP10.43□□□□□ -0.74
CLN8-201ENST00000331222 ARHGAP8P85298 464 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 SCGB2B2Q4G0G5 96 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 NIPA1Q7RTP0 329 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 TSTD1Q8NFU3 115 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 TNFRSF25Q93038 417 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 PYCR2Q96C36 320 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 DIRAS2Q96HU8 199 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 DMRTB1Q96MA1 342 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 AGAP2Q99490 1192 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 KLRF1Q9NZS2 232 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 DKK3Q9UBP4 350 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 RAP2CQ9Y3L5 183 aa10.43□□□□□ -0.74
CLN8-201ENST00000331222 CCDC163A0A0D9SF12 145 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 A0A1B0GVT2 93 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CARNS1A5YM72 827 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 ZNF878C9JN71 531 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 MEIS2O14770 477 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 NME6O75414 186 aaPredicted RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 TBX18O95935 607 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CYP1A2P05177 515 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 LAG3P18627 525 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CPN2P22792 545 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 LMO2P25791 158 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 LRRC32Q14392 662 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CMTR2Q8IYT2 770 aaKnown RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 MCCC1Q96RQ3 725 aaPredicted RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 MEAF6Q9HAF1 191 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 DNAAF2Q9NVR5 837 aaKnown RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 L1RE1Q9UN81 338 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 RIPK3Q9Y572 518 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 hCG_1818297A0A087WSY0 165 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 FABP3P05413 133 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 ZNF20P17024 532 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 GRK5P34947 590 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 ASMTP46597 345 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 GPM6BQ13491 265 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 FAM156AQ8NDB6 213 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 OR10A6Q8NH74 314 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 C1orf216Q8TAB5 229 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.42□□□□□ -0.74
CLN8-201ENST00000331222 ERVK-18Q9QC07 812 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 MYO5BQ9ULV0 1848 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 A0A0J9YVX5 310 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 FAM240BA0A1B0GVZ2 78 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 PSMD10O75832 226 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 NADKO95544 446 aaPredicted RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 UROSP10746 265 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 PTPN2P17706 415 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CYP2C18P33260 490 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CSKP41240 450 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CSTF1Q05048 431 aaKnown RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 FASTKD3Q14CZ7 662 aaKnown RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 MEA1Q16626 185 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 INTS6LQ5JSJ4 861 aaKnown RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 CDKAL1Q5VV42 579 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 REP15Q6BDI9 236 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CAND1Q86VP6 1230 aaKnown RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 OR2T12Q8NG77 320 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CHCHD6Q9BRQ6 235 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 TRPV5Q9NQA5 729 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 TRAFD1O14545 582 aaPredicted RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 TOR1BO14657 336 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 PAPSS2O95340 614 aaPredicted RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 ELOAQ14241 798 aaKnown RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 PDGFRLQ15198 375 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 VARS2Q5ST30 1063 aaKnown RBP10.42□□□□□ -0.74
CLN8-201ENST00000331222 CREG2Q8IUH2 290 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 SCAMP5Q8TAC9 235 aa10.42□□□□□ -0.74
CLN8-201ENST00000331222 CLEC4CQ8WTT0 213 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms