RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 MKRN2Q9H000 416 aaKnown RBP23.96■■□□□ 1.43
SOX1-201ENST00000330949 DPEP3Q9H4B8 488 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 KCNN3Q9UGI6 736 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 ADGRE2Q9UHX3 823 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 ERVW-1Q9UQF0 538 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 SEMA3DO95025 777 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 HOXD8P13378 290 aaPredicted RBP23.96■■□□□ 1.43
SOX1-201ENST00000330949 PPP3CCP48454 512 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 PPP1R8Q12972 351 aaKnown RBP23.96■■□□□ 1.43
SOX1-201ENST00000330949 KYAT1Q16773 422 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 TBRG1Q3YBR2 411 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 CAPN13Q6MZZ7 669 aaPredicted RBP23.96■■□□□ 1.43
SOX1-201ENST00000330949 TRAF7Q6Q0C0 670 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 NDRG1Q92597 394 aaKnown RBP23.96■■□□□ 1.43
SOX1-201ENST00000330949 GDF15Q99988 308 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 APOL4Q9BPW4 351 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 CCDC32Q9BV29 185 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 FBXO10Q9UK96 956 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 SPEF1Q9Y4P9 236 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 MYLKQ15746 1914 aa23.96■■□□□ 1.43
SOX1-201ENST00000330949 FZD9O00144 591 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 SSX4O60224 188 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 LCKP06239 509 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 ZNF286BP0CG31 522 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 INSRRP14616 1297 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 IGFBP5P24593 272 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 ETV6P41212 452 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 LCP2Q13094 533 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 TMEM207Q6UWW9 146 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 LRRC8DQ7L1W4 858 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 ZFAND4Q86XD8 727 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 KBTBD8Q8NFY9 601 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 OR2T12Q8NG77 320 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 IPCEF1Q8WWN9 437 aaPredicted RBP23.95■■□□□ 1.42
SOX1-201ENST00000330949 NTAN1Q96AB6 310 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 TMCO6Q96DC7 493 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 RIPOR3Q96MK2 946 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 NSUN5Q96P11 429 aaKnown RBP23.95■■□□□ 1.42
SOX1-201ENST00000330949 PHOX2BQ99453 314 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 EVLQ9UI08 416 aaPredicted RBP23.95■■□□□ 1.42
SOX1-201ENST00000330949 INVSQ9Y283 1065 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 SCN1AP35498 2009 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 WISP3O95389 354 aaPredicted RBP23.95■■□□□ 1.42
SOX1-201ENST00000330949 PFKFB4Q16877 469 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 ATP6AP1LQ52LC2 224 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 TMEM179BQ7Z7N9 219 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 RAB43Q86YS6 212 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 FAM109AQ8N4B1 249 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 DPF3Q92784 378 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 ITCHQ96J02 903 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 TMEM209Q96SK2 561 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 GON7Q9BXV9 100 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 ZFP14Q9HCL3 533 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 ENTPD7Q9NQZ7 604 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 RNF6Q9Y252 685 aa23.95■■□□□ 1.42
SOX1-201ENST00000330949 ARF4P18085 180 aaPredicted RBP23.94■■□□□ 1.42
SOX1-201ENST00000330949 CTSKP43235 329 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 GPLD1P80108 840 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 LRRC26Q2I0M4 334 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 EFL1Q7Z2Z2 1120 aaKnown RBP23.94■■□□□ 1.42
SOX1-201ENST00000330949 NOXA1Q86UR1 476 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 RIOX2Q8IUF8 465 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 LSMEM1Q8N8F7 131 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 OR52K2Q8NGK3 314 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 PYCR2Q96C36 320 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 KIF12Q96FN5 646 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 PDLIM5Q96HC4 596 aaKnown RBP23.94■■□□□ 1.42
SOX1-201ENST00000330949 FCRL5Q96RD9 977 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 POLR3BQ9NW08 1133 aaPredicted RBP23.94■■□□□ 1.42
SOX1-201ENST00000330949 SNX6Q9UNH7 406 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 KRT87PA6NCN2 255 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 A8MV72 311 aaPredicted RBP23.94■■□□□ 1.42
SOX1-201ENST00000330949 DSCR3O14972 297 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 CD4P01730 458 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 OR3A3P47888 321 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 ERVK-8P63133 956 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 ADIGQ0VDE8 80 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 SCAPQ12770 1279 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 SYT16Q17RD7 645 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 APOBEC3FQ8IUX4 373 aaKnown RBP23.94■■□□□ 1.42
SOX1-201ENST00000330949 OR8J3Q8NGG0 315 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 SETD6Q8TBK2 473 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 ZNF583Q96ND8 569 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 TSGA13Q96PP4 275 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 CITED4Q96RK1 184 aa23.94■■□□□ 1.42
SOX1-201ENST00000330949 HMX3A6NHT5 357 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 LRRC14BA6NHZ5 514 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 CYP2A7P20853 494 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 EDNRBP24530 442 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 BCL7AQ4VC05 210 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 PROKR1Q8TCW9 393 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 RNF170Q96K19 258 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 ZNF717Q9BY31 904 aaPredicted RBP23.93■■□□□ 1.42
SOX1-201ENST00000330949 BRCA2P51587 3418 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 SOCS7O14512 581 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 POLR1CO15160 346 aaPredicted RBP23.93■■□□□ 1.42
SOX1-201ENST00000330949 ITGA2P17301 1181 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 LIPAP38571 399 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 HTR2BP41595 481 aa23.93■■□□□ 1.42
SOX1-201ENST00000330949 PRIM2P49643 509 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms