RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 MATN3O15232 486 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 AIREO43918 545 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 PGLSO95336 258 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 PAPSS2O95340 614 aaPredicted RBP12.58□□□□□ -0.4
CCDC60-201ENST00000327554 RPS17P08708 135 aaKnown RBP12.58□□□□□ -0.4
CCDC60-201ENST00000327554 DBTP11182 482 aaKnown RBP12.58□□□□□ -0.4
CCDC60-201ENST00000327554 CYP4B1P13584 511 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 IGFBP5P24593 272 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 ARL1P40616 181 aaPredicted RBP12.58□□□□□ -0.4
CCDC60-201ENST00000327554 ZNF135P52742 658 aaPredicted RBP12.58□□□□□ -0.4
CCDC60-201ENST00000327554 DGKQP52824 942 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 WNT3AP56704 352 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 HUNKP57058 714 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 PLIN5Q00G26 463 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 SYT16Q17RD7 645 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 AAK1Q2M2I8 961 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 HABP4Q5JVS0 413 aaKnown RBP12.58□□□□□ -0.4
CCDC60-201ENST00000327554 PRR23CQ6ZRP0 262 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 HIPK1Q86Z02 1210 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 FNDC5Q8NAU1 212 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 OR6P1Q8NGX9 317 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 SUN5Q8TC36 379 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 RASSF5Q8WWW0 418 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 SPATA33Q96N06 139 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 DEPDC7Q96QD5 511 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 BARD1Q99728 777 aaKnown RBP12.58□□□□□ -0.4
CCDC60-201ENST00000327554 MFSD1Q9H3U5 465 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 TFB2MQ9H5Q4 396 aaKnown RBP12.58□□□□□ -0.4
CCDC60-201ENST00000327554 IKZF5Q9H5V7 419 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 WDCPQ9H6R7 721 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 ARNT2Q9HBZ2 717 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 PRDM8Q9NQV8 689 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 PLSCR3Q9NRY6 295 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 HSPE1-MOB4S4R3N1 261 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 PCM1Q15154 2024 aa12.58□□□□□ -0.4
CCDC60-201ENST00000327554 SUPT3HB4E1H0 165 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 PIRO00625 290 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 ICMTO60725 284 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 MRPS14O60783 128 aaKnown RBP12.57□□□□□ -0.4
CCDC60-201ENST00000327554 FAM20BO75063 409 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 SEMA3DO95025 777 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 UROSP10746 265 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 DDOSTP39656 456 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 CXCR3P49682 368 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 SUOXP51687 545 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 YWHAHQ04917 246 aaPredicted RBP12.57□□□□□ -0.4
CCDC60-201ENST00000327554 KEAP1Q14145 624 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 MFSD10Q14728 455 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 PRSS36Q5K4E3 855 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 WDR45BQ5MNZ6 344 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 ANKS6Q68DC2 871 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 LIMS2Q7Z4I7 341 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 MICU2Q8IYU8 434 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 OR52E4Q8NGH9 312 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 GIPC2Q8TF65 315 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 SDHCQ99643 169 aaPredicted RBP12.57□□□□□ -0.4
CCDC60-201ENST00000327554 ITPAQ9BY32 194 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 RIBC2Q9H4K1 309 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 AS3MTQ9HBK9 375 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 ATP13A1Q9HD20 1204 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 CCNB1IP1Q9NPC3 277 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 RBM22Q9NW64 420 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCDC60-201ENST00000327554 USP21Q9UK80 565 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 IKZF3Q9UKT9 509 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 SNX6Q9UNH7 406 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 A0A0U1RQS6 177 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 CENPXA8MT69 81 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 M0R082 166 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 ERVH48-1M5A8F1 160 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 SNX4O95219 450 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 INSRRP14616 1297 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 GADD45AP24522 165 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 SERPINH1P50454 418 aaKnown RBP12.57□□□□□ -0.4
CCDC60-201ENST00000327554 MAP3K7CLP57077 242 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 DEFA1P59665 94 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 DEFA3P59666 94 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 PON2Q15165 354 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 CEP78Q5JTW2 689 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 Q6ZSR9 355 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 GPRIN1Q7Z2K8 1008 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 FAM126BQ8IXS8 530 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 FBXO39Q8N4B4 442 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 AGBL3Q8NEM8 1001 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 APPL2Q8NEU8 664 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 OR10A6Q8NH74 314 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 ANGPTL6Q8NI99 470 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 COPS5Q92905 334 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 TNIP3Q96KP6 325 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 REXO4Q9GZR2 422 aaKnown RBP12.57□□□□□ -0.4
CCDC60-201ENST00000327554 HEBP1Q9NRV9 189 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 EHD3Q9NZN3 535 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 KCNH4Q9UQ05 1017 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 ERVW-1Q9UQF0 538 aa12.57□□□□□ -0.4
CCDC60-201ENST00000327554 A8MV72 311 aaPredicted RBP12.56□□□□□ -0.4
CCDC60-201ENST00000327554 CXCR6O00574 342 aa12.56□□□□□ -0.4
CCDC60-201ENST00000327554 SOCS7O14512 581 aa12.56□□□□□ -0.4
CCDC60-201ENST00000327554 ANKRD28O15084 1053 aa12.56□□□□□ -0.4
CCDC60-201ENST00000327554 KERAO60938 352 aa12.56□□□□□ -0.4
CCDC60-201ENST00000327554 APOA1P02647 267 aa12.56□□□□□ -0.4
CCDC60-201ENST00000327554 EFNA1P20827 205 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms