RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SCN9AQ15858 1988 aa12.56□□□□□ -0.4
DNMT3A-202ENST00000321117 STK16O75716 305 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 SLC25A14O95258 325 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 TBX18O95935 607 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 CD36P16671 472 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 ACVRL1P37023 503 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 FOXA1P55317 472 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 DNASE1L3Q13609 305 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 C1DQ13901 141 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 DENND5AQ6IQ26 1287 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 RASAL3Q86YV0 1011 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 BBS7Q8IWZ6 715 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 PELI3Q8N2H9 469 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 EEF1AKMT1Q8WVE0 214 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 B3GALT6Q96L58 329 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 CIPCQ9C0C6 399 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 TREX1Q9NSU2 369 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 TRMT13Q9NUP7 481 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 C1orf109Q9NX04 203 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 ENOPH1Q9UHY7 261 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 EFCAB9A8MZ26 197 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 PPP6CO00743 305 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 B4GAT1O43505 415 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 FABP3P05413 133 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 FDXRP22570 491 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 EMX2Q04743 252 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 ELP6Q0PNE2 266 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 MRPL28Q13084 256 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 DEPDC4Q8N2C3 294 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 FUNDC2Q9BWH2 189 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 NAA50Q9GZZ1 169 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 PCDH12Q9NPG4 1184 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 PRRG1O14668 218 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 CCNKO75909 580 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 PGLSO95336 258 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 HAPLN1P10915 354 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 MYCLP1P12525 358 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 GRK3P35626 688 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 NDUFA5Q16718 116 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 ZNF792Q3KQV3 632 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 PAGE3Q5JUK9 113 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 KANK2Q63ZY3 851 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 HMBOX1Q6NT76 420 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 CERS6Q6ZMG9 384 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 SLC30A3Q99726 388 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 LHPPQ9H008 270 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 MAGEH1Q9H213 219 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 PADI3Q9ULW8 664 aa12.55□□□□□ -0.4
DNMT3A-202ENST00000321117 DNAJC25-GNG10A0A024R161 153 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 SCAMP3O14828 347 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 SUV39H1O43463 412 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 XPNPEP2O43895 674 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 GPR32O75388 356 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 OR56A5P0C7T3 313 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 AQP1P29972 269 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 MAP2K5Q13163 448 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 CYP2A13Q16696 494 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 SYT16Q17RD7 645 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 ANKDD1AQ495B1 522 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 OR4F6Q8NGB9 312 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 ELMO1Q92556 727 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 TEX12Q9BXU0 123 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 DYRK4Q9NR20 520 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 CRNNQ9UBG3 495 aaPredicted RBP12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 CD300AQ9UGN4 299 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 FFAR2O15552 330 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 F2P00734 622 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 ALDH2P05091 517 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 TYMPP19971 482 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 RPS14P62263 151 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 ALFQ53S48 1182 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 ABHD11Q8NFV4 315 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 OR10Q1Q8NGQ4 319 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 STARD8Q92502 1023 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 NT5C3BQ969T7 300 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 GOLGA4Q13439 2230 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 DFNA5O60443 496 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 ERN1O75460 977 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 SNAI1O95863 264 aaPredicted RBP12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 COL6A1P12109 1028 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 GSTM2P28161 218 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 CRATP43155 626 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 SPANXN4Q5MJ08 99 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 Q6ZNX1 250 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 SLC22A16Q86VW1 577 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 MED8Q96G25 268 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 POLR3BQ9NW08 1133 aaPredicted RBP12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 FAM118AQ9NWS6 357 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 PDE4DIPQ5VU43 2346 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 H0Y858 1186 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 PTGESO14684 152 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 XYLBO75191 536 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 CREG1O75629 220 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 CLDN9O95484 217 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 NNMTP40261 264 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 IST1P53990 364 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 CDC42P60953 191 aa12.54□□□□□ -0.4
DNMT3A-202ENST00000321117 VBP1P61758 197 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms