RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 FAM83EQ2M2I3 478 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 TRIM61Q5EBN2 209 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 MBOAT1Q6ZNC8 495 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 TAF8Q7Z7C8 310 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 FSTL5Q8N475 847 aaPredicted RBP15.08■□□□□ 0
PDLIM5-202ENST00000318007 PRSS33Q8NF86 280 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 HM13Q8TCT9 377 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 LMX1AQ8TE12 382 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 PATE1Q8WXA2 126 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 PKNOX2Q96KN3 472 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 UBXN10Q96LJ8 280 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 NRTNQ99748 197 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 MECRQ9BV79 373 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 WWP1Q9H0M0 922 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 TBC1D29Q9UFV1 150 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 ANKRD12Q6UB98 2062 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 PI4KAP42356 2102 aa15.08■□□□□ 0
PDLIM5-202ENST00000318007 SLC5A10A0PJK1 596 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 VILLO15195 856 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 POLR3GO15318 223 aaPredicted RBP15.07■□□□□ 0
PDLIM5-202ENST00000318007 TYROBPO43914 113 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 WISP3O95389 354 aaPredicted RBP15.07■□□□□ 0
PDLIM5-202ENST00000318007 RGS4P49798 205 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 BNC1Q01954 994 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 TCF15Q12870 199 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 TTC19Q6DKK2 380 aaPredicted RBP15.07■□□□□ 0
PDLIM5-202ENST00000318007 LRRC8EQ6NSJ5 796 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 TAX1BP1Q86VP1 789 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 LMNTD1Q8N9Z9 388 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 PHC3Q8NDX5 983 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 MOCOSQ96EN8 888 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 GTPBP2Q9BX10 602 aaKnown RBP15.07■□□□□ 0
PDLIM5-202ENST00000318007 IL21RQ9HBE5 538 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 IMP3Q9NV31 184 aaKnown RBP15.07■□□□□ 0
PDLIM5-202ENST00000318007 UCKL1Q9NWZ5 548 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 SENP1Q9P0U3 644 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 GMEB2Q9UKD1 530 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 EMCNQ9ULC0 261 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 FANCMQ8IYD8 2048 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 NEMP2A6NFY4 417 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 GPR89AB7ZAQ6 455 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 F8W8V4 182 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 GLRA3O75311 464 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 GPC4O75487 556 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 GPR89BP0CG08 455 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 VCLP18206 1134 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 BDKRB1P46663 353 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 KCNC1P48547 511 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 ILF3Q12906 894 aaKnown RBP eCLIP15.07■□□□□ 0
PDLIM5-202ENST00000318007 GRIK2Q13002 908 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 PRKG2Q13237 762 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 AGAP9Q5VTM2 703 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 CLEC14AQ86T13 490 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 NRROSQ86YC3 692 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 NKAPQ8N5F7 415 aaKnown RBP15.07■□□□□ 0
PDLIM5-202ENST00000318007 ACMSDQ8TDX5 336 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 DLG3Q92796 817 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 CABS1Q96KC9 395 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 LINC00615Q96LM1 132 aaPredicted RBP15.07■□□□□ 0
PDLIM5-202ENST00000318007 DPEP2Q9H4A9 486 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 RMI1Q9H9A7 625 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 NMRAL1Q9HBL8 299 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 POPDC3Q9HBV1 291 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 ABCF3Q9NUQ8 709 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 SCHIP1Q9P0W5 487 aaPredicted RBP15.07■□□□□ 0
PDLIM5-202ENST00000318007 SIRPGQ9P1W8 387 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 RAB23Q9ULC3 237 aa15.07■□□□□ 0
PDLIM5-202ENST00000318007 DLL1O00548 723 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 TNFRSF10CO14798 259 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 FFAR2O15552 330 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 CSF2P04141 144 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 SLC35G4P0C7Q5 338 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 CRHR1P34998 444 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 MPLP40238 635 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 BNIP3Q12983 259 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 CLCA4Q14CN2 919 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 PHKG1Q16816 387 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 DEFB133Q30KQ1 61 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 CCSMST1Q4G0I0 132 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 ZNF658BQ4V348 819 aaPredicted RBP15.06■□□□□ 0
PDLIM5-202ENST00000318007 PLEKHS1Q5SXH7 462 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 KLC3Q6P597 504 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 ZC3H14Q6PJT7 736 aaKnown RBP15.06■□□□□ 0
PDLIM5-202ENST00000318007 FRA10AC1Q70Z53 315 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 IQCHQ86VS3 1027 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 GATAD2AQ86YP4 633 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 OXR1Q8N573 874 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 JPH3Q8WXH2 748 aaPredicted RBP15.06■□□□□ 0
PDLIM5-202ENST00000318007 SKA1Q96BD8 255 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 SCARF2Q96GP6 870 aaPredicted RBP15.06■□□□□ 0
PDLIM5-202ENST00000318007 C12orf66Q96MD2 445 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 GPR78Q96P69 363 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.06■□□□□ 0
PDLIM5-202ENST00000318007 DCDC2Q9UHG0 476 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 RNF112Q9ULX5 631 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 PLAGL1Q9UM63 463 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 DOLKQ9UPQ8 538 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 SMG5Q9UPR3 1016 aaKnown RBP15.06■□□□□ 0
PDLIM5-202ENST00000318007 ASF1AQ9Y294 204 aa15.06■□□□□ 0
PDLIM5-202ENST00000318007 TDRKHQ9Y2W6 561 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms