RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 TBC1D3FA6NER0 549 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TBC1D3LB9A6J9 549 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 ZBTB11O95625 1053 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TBC1D3HP0C7X1 549 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TYRP14679 529 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 RANBP1P43487 201 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 C16orf72Q14CZ0 275 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 GPRC6AQ5T6X5 926 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TBC1D3GQ6DHY5 549 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TBC1D3CQ6IPX1 549 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 DPY19L3Q6ZPD9 716 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TBC1D3Q8IZP1 549 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 STX19Q8N4C7 294 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 REEP1Q9H902 201 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 FDXRP22570 491 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 RRM2P31350 389 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 FPGSQ05932 587 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 SFSWAPQ12872 951 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 ADGRE1Q14246 886 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 FAM174BQ3ZCQ3 159 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 FAM26DQ5JW98 314 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TMEM214Q6NUQ4 689 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 PATL1Q86TB9 770 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 SYVN1Q86TM6 617 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 CYP4Z1Q86W10 505 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 C1orf52Q8N6N3 182 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 IRF7Q92985 503 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 BTBD9Q96Q07 612 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 PAIP1Q9H074 479 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 PRKAB1Q9Y478 270 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 PCCBP05166 539 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 MYCLP1P12525 358 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 EPORP19235 508 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 DNAJB13P59910 316 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 C2orf80Q0P641 193 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 SFT2D3Q587I9 215 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 FAM234BA2RU67 622 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 GSK3BP49841 420 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 C18orf21Q32NC0 220 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 GALNT5Q7Z7M9 940 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 OR52B6Q8NGF0 335 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 B4GALNT2Q8NHY0 566 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 ASB9Q96DX5 294 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 SORT1Q99523 831 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 CGREF1Q99674 301 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 WASH4PA8MWX3 477 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 SAP18O00422 153 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TGFB1P01137 390 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 DNTTP04053 509 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 EIF2S1P05198 315 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 MTTPP55157 894 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 INO80DQ53TQ3 878 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 ISCA2Q86U28 154 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 MARCH5Q9NX47 278 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 H3BN98 237 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 PREPP48147 710 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 FOXA1P55317 472 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 FAM189BP81408 668 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 CSTF3Q12996 717 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 CCNIQ14094 377 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 DGCR6Q14129 220 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 RSPO2Q6UXX9 243 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 TEX12Q9BXU0 123 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 ARNT2Q9HBZ2 717 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 MAGEE1Q9HCI5 957 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 RPS9P46781 194 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 SLC47A1Q96FL8 570 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 IL36AQ9UHA7 158 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 MSRAQ9UJ68 235 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 RAB23Q9ULC3 237 aa6.08□□□□□ -1.44
PRKDC-201ENST00000314191 CFAP20Q9Y6A4 193 aaKnown RBP6.08□□□□□ -1.44
PRKDC-201ENST00000314191 PDLIM1O00151 329 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 PGLSO95336 258 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 SSR2P43308 183 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 NFKB2Q00653 900 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 TCAIMQ8N3R3 496 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 OR14C36Q8NHC7 312 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 TUBGCP5Q96RT8 1024 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 CD244Q9BZW8 370 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 POPDC3Q9HBV1 291 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 UBR2Q8IWV8 1755 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 HMX2A2RU54 273 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 CXCR6O00574 342 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 GPIP06744 558 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 GSTM1P09488 218 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 MAT2AP31153 395 aaKnown RBP6.07□□□□□ -1.44
PRKDC-201ENST00000314191 RPL26P61254 145 aaKnown RBP6.07□□□□□ -1.44
PRKDC-201ENST00000314191 UBE2E3Q969T4 207 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 CHID1Q9BWS9 393 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 C3orf18Q9UK00 162 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 ADAMTS6Q9UKP5 1117 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 TPRKBQ9Y3C4 175 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 SAMHD1Q9Y3Z3 626 aaKnown RBP6.07□□□□□ -1.44
PRKDC-201ENST00000314191 hCG_2039718K7EN88 272 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 AXIN1O15169 862 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 PRKD3O94806 890 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 C8GP07360 202 aa6.07□□□□□ -1.44
PRKDC-201ENST00000314191 HNRNPCP07910 306 aaKnown RBP eCLIP6.07□□□□□ -1.44
PRKDC-201ENST00000314191 CYP4B1P13584 511 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms