RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ARL8BQ9NVJ2 186 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SNED1Q8TER0 1413 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 A0A1B0GVI7 797 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ILVBLA1L0T0 632 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 EFCAB9A8MZ26 197 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 CHP2O43745 196 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ENTPD6O75354 484 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 FPR1P21462 350 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 EPHA3P29320 983 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 CD86P42081 329 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SOX9P48436 509 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 UBAP2LQ14157 1087 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 KIAA1614Q5VZ46 1190 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ZC3HC1Q86WB0 502 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 PPCDCQ96CD2 204 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 TM9SF2Q99805 663 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ZCWPW1Q9H0M4 648 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 AFF4Q9UHB7 1163 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 AGO1Q9UL18 857 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 CDH10Q9Y6N8 788 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 PTBP1P26599 531 aaKnown RBP eCLIP8.7□□□□□ -1.025e-6■■■□□ 16.4
COL6A5-202ENST00000312481 NRG1Q02297 640 aaPredicted RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 BIKQ13323 160 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 DCST1Q5T197 706 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 MSANTD2Q6P1R3 559 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 FOXR1Q6PIV2 292 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SNX20Q7Z614 316 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 CHERPQ8IWX8 916 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 CHPFQ8IZ52 775 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 POP1Q99575 1024 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ZSCAN5AQ9BUG6 496 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ZFYVE1Q9HBF4 777 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 FARSBQ9NSD9 589 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SEC14L3Q9UDX4 400 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 MYF6P23409 242 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 HTR1BP28222 390 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 CD47Q08722 323 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 MAB21L1Q13394 359 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 CAPSQ13938 189 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SLC1A5Q15758 541 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 USP41Q3LFD5 358 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SLC30A10Q6XR72 485 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 TRIT1Q9H3H1 467 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SIX2Q9NPC8 291 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SPG21Q9NZD8 308 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 BAIAP2Q9UQB8 552 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 OR2AG2A6NM03 316 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SLC19A2O60779 497 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 PGRP06401 933 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 HTR1EP28566 365 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 AGTR1P30556 359 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 CTSKP43235 329 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 HNRNPFP52597 415 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 PSPHP78330 225 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 PTSQ03393 145 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 HECTD2Q5U5R9 776 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SPESP1Q6UW49 350 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 C17orf64Q86WR6 236 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 CBR4Q8N4T8 237 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 DCUN1D5Q9BTE7 237 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 FZD8Q9H461 694 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 TRBC1P01850 177 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 MBL2P11226 248 aaPredicted RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 GOT1P17174 413 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 ITGAXP20702 1163 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 IDH2P48735 452 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 CLCN3P51790 818 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 FAM110CQ1W6H9 321 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 IFI44LQ53G44 452 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 TCEAL5Q5H9L2 206 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 REP15Q6BDI9 236 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 MACC1Q6ZN28 852 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 NECAB2Q7Z6G3 386 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 DDX53Q86TM3 631 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 IFNLR1Q8IU57 520 aaPredicted RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 SYTL1Q8IYJ3 562 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 SNX27Q96L92 541 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 UNKLQ9H9P5 680 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 CYP4F12Q9HCS2 524 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 NUFIP1Q9UHK0 495 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 LOC100506127A0A0U1RQW1 187 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 SOBPA7XYQ1 873 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 MAGEB17A8MXT2 336 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 OAZ2O95190 189 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 STXBP1P61764 594 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 GALNT2Q10471 571 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 MPPE1Q53F39 396 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 SLC22A10Q63ZE4 541 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 LCN8Q6JVE9 175 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 METAP1DQ6UB28 335 aaPredicted RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 KCNK18Q7Z418 384 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 FZD10Q9ULW2 581 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 GRM6O15303 877 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 OR6B1O95007 311 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 STARP49675 285 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF630Q2M218 657 aaPredicted RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 GALNT6Q8NCL4 622 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 KLHL6Q8WZ60 621 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 LENG8Q96PV6 779 aaPredicted RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 SLC30A2Q9BRI3 323 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms