RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 KIAA1522Q9P206 1035 aaPredicted RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 MSI1O43347 362 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 NMBRP28336 390 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 ACSL1P33121 698 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 EPHX2P34913 555 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 MAPK12P53778 367 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 NPTX1Q15818 432 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 DACT2Q5SW24 774 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 TMEM192Q8IY95 271 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 CFAP52Q8N1V2 620 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 EBF2Q9HAK2 575 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 TCF7L1Q9HCS4 588 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 ARHGEF4Q9NR80 690 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 FKBP7Q9Y680 259 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 OR2AT4A6NND4 320 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 PER2O15055 1255 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 RHOQP17081 205 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 GPD2P43304 727 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 HADHBP55084 474 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 YBEYP58557 167 aaPredicted RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 LAPTM5Q13571 262 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 TSTD2Q5T7W7 516 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 OR4C6Q8NH72 309 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 ZNF639Q9UID6 485 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 FAM234BA2RU67 622 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 IQCF5A8MTL0 148 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 CD48P09326 243 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 WDR4P57081 412 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 RPS14P62263 151 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 CSTF1Q05048 431 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 CHIT1Q13231 466 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 LPPQ93052 612 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 ZNF558Q96NG5 402 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 CORO1BQ9BR76 489 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 IRF2BPLQ9H1B7 796 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 DCSTAMPQ9H295 470 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 C4BPAP04003 597 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 CYP11A1P05108 521 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 CDH1P12830 882 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 ECHS1P30084 290 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 ARCN1P48444 511 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 FKBP1AP62942 108 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 FAAH2Q6GMR7 532 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 SLC30A6Q6NXT4 461 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 SYCE2Q6PIF2 218 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 RANBP3LQ86VV4 465 aaPredicted RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 PHC3Q8NDX5 983 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 TNFRSF25Q93038 417 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 RFT1Q96AA3 541 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 EIF2B4Q9UI10 523 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 NR2E1Q9Y466 385 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 NOTOA8MTQ0 251 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 CDK14O94921 469 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 RLN2P04090 185 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 CD2P06729 351 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 ARF3P61204 181 aaPredicted RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 ARF1P84077 181 aaKnown RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 TARBP2Q15633 366 aaKnown RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 CATSPERGQ6ZRH7 1159 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 ZBTB8BQ8NAP8 495 aaPredicted RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 ZMIZ2Q8NF64 920 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 ZSWIM3Q96MP5 696 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 TTYH3Q9C0H2 523 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 MEMO1Q9Y316 297 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 SPIN1Q9Y657 262 aaPredicted RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 MAU2Q9Y6X3 613 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 GRIN2DO15399 1336 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 H3BSA7 217 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 SERPINA3P01011 423 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 AKT2P31751 481 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 SLC15A1P46059 708 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 PNLIPRP1P54315 467 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 EEFSECP57772 596 aaKnown RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 CDKL1Q00532 357 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 DSC2Q02487 901 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 MVKQ03426 396 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 TUBA3CQ13748 450 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 SF1Q15637 639 aaKnown RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 SYT16Q17RD7 645 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 ATP13A5Q4VNC0 1218 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 SLC9B1Q4ZJI4 515 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 C6orf183Q5T699 404 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 SPATA22Q8NHS9 363 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 KCTD7Q96MP8 289 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 EXO5Q9H790 373 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 MKLN1Q9UL63 735 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 CACNB4O00305 520 aaPredicted RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 GNRH1P01148 92 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 CSTF2P33240 577 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 GNALP38405 381 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 RBM34P42696 430 aaKnown RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 RHBDL3P58872 404 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 UBAP2Q5T6F2 1119 aaKnown RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 ANO7Q6IWH7 933 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 ZCCHC12Q6PEW1 402 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 ARMC10Q8N2F6 343 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 OR8D1Q8WZ84 308 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 NMUR1Q9HB89 426 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 OAZ3Q9UMX2 235 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 KANTRA0A1W2PQU2 76 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms