RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 DGKEP52429 567 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 LIPEQ05469 1076 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 PPP3CAQ08209 521 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 BNIP3Q12983 259 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 SEMA5AQ13591 1074 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 MYBPC3Q14896 1274 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ACAP2Q15057 778 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ACOX1Q15067 660 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ACSBG2Q5FVE4 666 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 NIPAL1Q6NVV3 410 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 PRSS55Q6UWB4 352 aaPredicted RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 RABEPKQ7Z6M1 372 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 SLC22A16Q86VW1 577 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ATAD1Q8NBU5 361 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 GLIS3Q8NEA6 775 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 VANGL1Q8TAA9 524 aaPredicted RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 ZNF461Q8TAF7 563 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 SLC44A1Q8WWI5 657 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 INTS10Q9NVR2 710 aaKnown RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.08□□□□□ -1.12
VPS41-202ENST00000310301 ERVW-1Q9UQF0 538 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 YIPF1Q9Y548 306 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 AXIN1O15169 862 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 SPATA31C1P0DKV0 1188 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 AQP1P29972 269 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 MAGEA12P43365 314 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 SLC9A3P48764 834 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ARFIP1P53367 373 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 MPP2Q14168 576 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 SNAPC1Q16533 368 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 INSCQ1MX18 579 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ANXA8L1Q5VT79 327 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 PTCRAQ6ISU1 281 aaPredicted RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 PIGWQ7Z7B1 504 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 RASGEF1CQ8N431 466 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 SPERTQ8NA61 448 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 FAXDC2Q96IV6 333 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ART5Q96L15 291 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 SNTG1Q9NSN8 517 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 IGSF9Q9P2J2 1179 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ISPDA4D126 451 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ZSCAN5BA6NJL1 495 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 GALTP07902 379 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 TAS2R40P59535 323 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ITPRIPL2Q3MIP1 535 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ZNF852Q6ZMS4 543 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 MSANTD1Q6ZTZ1 278 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 FAM183BPQ6ZVS7 135 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 CNTD1Q8N815 330 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 ZFP28Q8NHY6 868 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 NXPE3Q969Y0 559 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 TP53INP1Q96A56 240 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 LENG8Q96PV6 779 aaPredicted RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 SNRNP25Q9BV90 132 aaKnown RBP8.08□□□□□ -1.12
VPS41-202ENST00000310301 ZDHHC7Q9NXF8 308 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 KCTD5Q9NXV2 234 aa8.08□□□□□ -1.12
VPS41-202ENST00000310301 TISP43B9A030 160 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 H3BSA7 217 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 M0QX08 132 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 TNFRSF11BO00300 401 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 PRH1P02810 166 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 GPIP06744 558 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 RPL3P39023 403 aaKnown RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 ZNF143P52747 638 aaPredicted RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 BCL2L1Q07817 233 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 CAMK1Q14012 370 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 WSCD2Q2TBF2 565 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 XKR6Q5GH73 641 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 GALNT12Q8IXK2 581 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 ZZZ3Q8IYH5 903 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 EFHD2Q96C19 240 aaPredicted RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 TMLHEQ9NVH6 421 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 RBM7Q9Y580 266 aaKnown RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 TJP1Q07157 1748 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 PAPSS1O43252 624 aaPredicted RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 NOS2P35228 1153 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 CBX5P45973 191 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 RORCP51449 518 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 FMO1Q01740 532 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 HSPA14Q0VDF9 509 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 TAF10Q12962 218 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 ARMC12Q5T9G4 340 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 FAM156AQ8NDB6 213 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 SLC9A6Q92581 669 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 R3HDMLQ9H3Y0 253 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 NEK6Q9HC98 313 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 BPIFA1Q9NP55 256 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 PPIEQ9UNP9 301 aaKnown RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 POMPQ9Y244 141 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 A0A1W2PQ67 120 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 METTL21EPA6NDL7 271 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 J3QRK9 145 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 PPIBP23284 216 aaKnown RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 DHPSP49366 369 aaPredicted RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 GSCP56915 257 aaPredicted RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 SHHQ15465 462 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 CPSF6Q16630 551 aaKnown RBP eCLIP8.07□□□□□ -1.12
VPS41-202ENST00000310301 ZC3H12AQ5D1E8 599 aaKnown RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 ANO7Q6IWH7 933 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 LAPTM4BQ86VI4 370 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms