RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 PIK3CGP48736 1102 aa23.62■■□□□ 1.37
RFWD2-201ENST00000308769 RPIAP49247 311 aa23.62■■□□□ 1.37
RFWD2-201ENST00000308769 DCDC1P59894 354 aa23.62■■□□□ 1.37
RFWD2-201ENST00000308769 ZNF648Q5T619 568 aaPredicted RBP23.62■■□□□ 1.37
RFWD2-201ENST00000308769 SPATA24Q86W54 205 aa23.62■■□□□ 1.37
RFWD2-201ENST00000308769 PQLC1Q8N2U9 271 aa23.62■■□□□ 1.37
RFWD2-201ENST00000308769 VPS33AQ96AX1 596 aa23.62■■□□□ 1.37
RFWD2-201ENST00000308769 SPDL1Q96EA4 605 aa23.62■■□□□ 1.37
RFWD2-201ENST00000308769 DCUN1D1Q96GG9 259 aa23.62■■□□□ 1.37
RFWD2-201ENST00000308769 GPATCH1Q9BRR8 931 aaKnown RBP23.62■■□□□ 1.37
RFWD2-201ENST00000308769 RIOK2Q9BVS4 552 aaKnown RBP23.62■■□□□ 1.37
RFWD2-201ENST00000308769 MRPL40Q9NQ50 206 aaKnown RBP23.62■■□□□ 1.37
RFWD2-201ENST00000308769 KLHL42Q9P2K6 505 aa23.62■■□□□ 1.37
RFWD2-201ENST00000308769 ITM2BQ9Y287 266 aa23.62■■□□□ 1.37
RFWD2-201ENST00000308769 ZFC3H1O60293 1989 aaKnown RBP23.61■■□□□ 1.37
RFWD2-201ENST00000308769 PRRT4C9JH25 899 aa23.61■■□□□ 1.37
RFWD2-201ENST00000308769 K7EPI3 171 aa23.61■■□□□ 1.37
RFWD2-201ENST00000308769 FXYD1O00168 92 aa23.61■■□□□ 1.37
RFWD2-201ENST00000308769 FFAR3O14843 346 aa23.61■■□□□ 1.37
RFWD2-201ENST00000308769 GPR42O15529 346 aa23.61■■□□□ 1.37
RFWD2-201ENST00000308769 MRPL19P49406 292 aaKnown RBP23.61■■□□□ 1.37
RFWD2-201ENST00000308769 YBX1P67809 324 aaKnown RBP23.61■■□□□ 1.37
RFWD2-201ENST00000308769 RCAN2Q14206 197 aa23.61■■□□□ 1.37
RFWD2-201ENST00000308769 CAPRIN1Q14444 709 aaKnown RBP23.61■■□□□ 1.37
RFWD2-201ENST00000308769 GBX1Q14549 363 aa23.61■■□□□ 1.37
RFWD2-201ENST00000308769 FAM78AQ5JUQ0 283 aa23.61■■□□□ 1.37
RFWD2-201ENST00000308769 HENMT1Q5T8I9 393 aaKnown RBP23.61■■□□□ 1.37
RFWD2-201ENST00000308769 BEND7Q8N7W2 519 aaPredicted RBP23.61■■□□□ 1.37
RFWD2-201ENST00000308769 ARL15Q9NXU5 204 aa23.61■■□□□ 1.37
RFWD2-201ENST00000308769 ASPDHA6ND91 283 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 LSM1O15116 133 aaKnown RBP23.6■■□□□ 1.37
RFWD2-201ENST00000308769 SLC6A11P48066 632 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 METAP1P53582 386 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 GRIN2CQ14957 1233 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 NR6A1Q15406 480 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 SAMD4BQ5PRF9 694 aaKnown RBP23.6■■□□□ 1.37
RFWD2-201ENST00000308769 ZFP1Q6P2D0 407 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 UBE2R2Q712K3 238 aaPredicted RBP23.6■■□□□ 1.37
RFWD2-201ENST00000308769 PARS2Q7L3T8 475 aaKnown RBP23.6■■□□□ 1.37
RFWD2-201ENST00000308769 NPAS3Q8IXF0 933 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 ETFBKMTQ8IXQ9 262 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 CASQ2O14958 399 aaPredicted RBP23.6■■□□□ 1.37
RFWD2-201ENST00000308769 SGTAO43765 313 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 DNAJA2O60884 412 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 SLC22A3O75751 556 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 ASLP04424 464 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 ANXA5P08758 320 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 KCNK10P57789 538 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 IRX1P78414 480 aaPredicted RBP23.6■■□□□ 1.37
RFWD2-201ENST00000308769 SFT2D3Q587I9 215 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 C6orf10Q5SRN2 563 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 PDE12Q6L8Q7 609 aaKnown RBP23.6■■□□□ 1.37
RFWD2-201ENST00000308769 DPPA4Q7L190 304 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 WFIKKN2Q8TEU8 576 aa23.6■■□□□ 1.37
RFWD2-201ENST00000308769 MUC22E2RYF6 1773 aaPredicted RBP23.59■■□□□ 1.37
RFWD2-201ENST00000308769 KRT87PA6NCN2 255 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 OR2AG2A6NM03 316 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 STK16O75716 305 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 IL12AP29459 219 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 MMP12P39900 470 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 NRIP1P48552 1158 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 ST8SIA6P61647 398 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 GRIK2Q13002 908 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 PDCD4Q53EL6 469 aaKnown RBP23.59■■□□□ 1.37
RFWD2-201ENST00000308769 BPIFB1Q8TDL5 484 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 KLHL4Q9C0H6 718 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 FARSBQ9NSD9 589 aaKnown RBP23.59■■□□□ 1.37
RFWD2-201ENST00000308769 C6orf203Q9P0P8 240 aaPredicted RBP23.59■■□□□ 1.37
RFWD2-201ENST00000308769 EPS15L1Q9UBC2 864 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 DKK3Q9UBP4 350 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 SLC27A6Q9Y2P4 619 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 RNF11Q9Y3C5 154 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 A0A1W2PP18 115 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 EIF3FO00303 357 aaPredicted RBP23.59■■□□□ 1.37
RFWD2-201ENST00000308769 KPNA3O00505 521 aaPredicted RBP23.59■■□□□ 1.37
RFWD2-201ENST00000308769 NME4O00746 187 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 NUAK1O60285 661 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 EPB42P16452 691 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 ZXDCQ2QGD7 858 aaPredicted RBP23.59■■□□□ 1.37
RFWD2-201ENST00000308769 HABP4Q5JVS0 413 aaKnown RBP23.59■■□□□ 1.37
RFWD2-201ENST00000308769 TRAM1L1Q8N609 369 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 PROKR1Q8TCW9 393 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 UCMAQ8WVF2 138 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 LRIG1Q96JA1 1093 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 ASB16Q96NS5 453 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 TRIM8Q9BZR9 551 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 COPS7BQ9H9Q2 264 aaPredicted RBP23.59■■□□□ 1.37
RFWD2-201ENST00000308769 FAM8A1Q9UBU6 413 aa23.59■■□□□ 1.37
RFWD2-201ENST00000308769 ELFN1P0C7U0 828 aa23.58■■□□□ 1.37
RFWD2-201ENST00000308769 HLA-EP13747 358 aa23.58■■□□□ 1.37
RFWD2-201ENST00000308769 MSH3P20585 1137 aa23.58■■□□□ 1.37
RFWD2-201ENST00000308769 VASPP50552 380 aaPredicted RBP23.58■■□□□ 1.37
RFWD2-201ENST00000308769 POLR2JP52435 117 aaKnown RBP23.58■■□□□ 1.37
RFWD2-201ENST00000308769 PDSS2Q86YH6 399 aa23.58■■□□□ 1.37
RFWD2-201ENST00000308769 SFTPA1Q8IWL2 248 aa23.58■■□□□ 1.37
RFWD2-201ENST00000308769 VN1R2Q8NFZ6 395 aa23.58■■□□□ 1.37
RFWD2-201ENST00000308769 LRRC58Q96CX6 371 aa23.58■■□□□ 1.37
RFWD2-201ENST00000308769 HOPXQ9BPY8 73 aaPredicted RBP23.58■■□□□ 1.37
RFWD2-201ENST00000308769 ABCD2Q9UBJ2 740 aa23.58■■□□□ 1.37
RFWD2-201ENST00000308769 KLQ9UEF7 1012 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms