RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 KLHL23Q8NBE8 558 aa11.17□□□□□ -0.62
PHTF2-203ENST00000307305 C7orf57Q8NEG2 295 aa11.17□□□□□ -0.62
PHTF2-203ENST00000307305 UBASH3BQ8TF42 649 aa11.17□□□□□ -0.62
PHTF2-203ENST00000307305 FOPNLQ96NB1 174 aa11.17□□□□□ -0.62
PHTF2-203ENST00000307305 CTPS2Q9NRF8 586 aa11.17□□□□□ -0.62
PHTF2-203ENST00000307305 EHD3Q9NZN3 535 aa11.17□□□□□ -0.62
PHTF2-203ENST00000307305 SPO11Q9Y5K1 396 aa11.17□□□□□ -0.62
PHTF2-203ENST00000307305 SMIM30A4D0T7 59 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 TRIM43BA6NCK2 446 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 ZNF487B1APH4 448 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 LOC730098B7Z3J9 87 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 SLC22A2O15244 555 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 KERAO60938 352 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 UGT2B4P06133 528 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 HOXB8P17481 243 aaPredicted RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 ALDH6A1Q02252 535 aaKnown RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 PPP4R4Q6NUP7 873 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 TTC23LQ6PF05 361 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 TRMT11Q7Z4G4 463 aaKnown RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 TMEM102Q8N9M5 508 aaPredicted RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 FRS2Q8WU20 508 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 GAB3Q8WWW8 586 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 LZICQ8WZA0 190 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 IMP4Q96G21 291 aaKnown RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 PRDM8Q9NQV8 689 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 COL2A1P02458 1487 aaPredicted RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 ACSL4O60488 711 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 MITFO75030 526 aaPredicted RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 PRKAR2AP13861 404 aaKnown RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 AAK1Q2M2I8 961 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 PARP15Q460N3 678 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 ARMC4Q5T2S8 1044 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 OR4F3Q6IEY1 312 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 TRAF7Q6Q0C0 670 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 USP50Q70EL3 339 aaPredicted RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 CLEC14AQ86T13 490 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 PIANPQ8IYJ0 282 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 SETD9Q8NE22 299 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 SMOC2Q9H3U7 446 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 TFB2MQ9H5Q4 396 aaKnown RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 RPF2Q9H7B2 306 aaKnown RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 MAP10Q9P2G4 905 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 RAB23Q9ULC3 237 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 ABCA3Q99758 1704 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 RAP2AP10114 183 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 AGXTP21549 392 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 MXD1Q05195 221 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 UPP1Q16831 310 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 SULT1C3Q6IMI6 304 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 SCD5Q86SK9 330 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 GATAD2AQ86YP4 633 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 AUTS2Q8WXX7 1259 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 GTPBP3Q969Y2 492 aaKnown RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 NACC2Q96BF6 587 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 RANBP9Q96S59 729 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 FARSBQ9NSD9 589 aaKnown RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 CLDN25C9JDP6 229 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 GABRDO14764 452 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 GJB5O95377 273 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 GPC1P35052 558 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 DEFA1P59665 94 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 DEFA3P59666 94 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 CYP2A13Q16696 494 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 OTUD1Q5VV17 481 aaPredicted RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 TXNDC11Q6PKC3 985 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 ZNF605Q86T29 641 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 IFNLR1Q8IU57 520 aaPredicted RBP11.16□□□□□ -0.62
PHTF2-203ENST00000307305 TEX37Q96LM6 180 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 C1QTNF1Q9BXJ1 281 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 TLR6Q9Y2C9 796 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 PRKAB1Q9Y478 270 aa11.16□□□□□ -0.62
PHTF2-203ENST00000307305 FAM234BA2RU67 622 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 ACOT8O14734 319 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 CLDN7O95471 211 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 MAD2L1Q13257 205 aaPredicted RBP11.15□□□□□ -0.62
PHTF2-203ENST00000307305 PCBP1Q15365 356 aaKnown RBP eCLIP11.15□□□□□ -0.62
PHTF2-203ENST00000307305 TAB1Q15750 504 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 RFTN2Q52LD8 501 aaPredicted RBP11.15□□□□□ -0.62
PHTF2-203ENST00000307305 COLEC12Q5KU26 742 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 SPANXN2Q5MJ10 180 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 ZNF513Q8N8E2 541 aaPredicted RBP11.15□□□□□ -0.62
PHTF2-203ENST00000307305 SH3RF2Q8TEC5 729 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 MIEF1Q9NQG6 463 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 PCDHB3Q9Y5E6 796 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 KPNA3O00505 521 aaPredicted RBP11.15□□□□□ -0.62
PHTF2-203ENST00000307305 EPORP19235 508 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 ARCN1P48444 511 aaKnown RBP11.15□□□□□ -0.62
PHTF2-203ENST00000307305 YBEYP58557 167 aaPredicted RBP11.15□□□□□ -0.62
PHTF2-203ENST00000307305 DNAJB13P59910 316 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 NPTX1Q15818 432 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 C6orf183Q5T699 404 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 KCTD11Q693B1 232 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 FUNDC1Q8IVP5 155 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 SLC15A4Q8N697 577 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 OR13J1Q8NGT2 312 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 FAR1Q8WVX9 515 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 MRPS31Q92665 395 aaKnown RBP11.15□□□□□ -0.62
PHTF2-203ENST00000307305 KIAA1191Q96A73 305 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 TMEM159Q96B96 161 aa11.15□□□□□ -0.62
PHTF2-203ENST00000307305 COPS8Q99627 209 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms