RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 RFTN2Q52LD8 501 aaPredicted RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 ZNF648Q5T619 568 aaPredicted RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 RSBN1Q5VWQ0 802 aaPredicted RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 KIAA0930Q6ICG6 404 aaPredicted RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 TIGD7Q6NT04 549 aaPredicted RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 CROCCP3Q8IVE0 287 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 CACTIN-AS1Q8N1I8 211 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 BBS5Q8N3I7 341 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 CARNMT1Q8N4J0 409 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 IL12RB2Q99665 862 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 HOPXQ9BPY8 73 aaPredicted RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 ATG10Q9H0Y0 220 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 MEAF6Q9HAF1 191 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 FAIMQ9NVQ4 179 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 ACTR3BQ9P1U1 418 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 MTRRQ9UBK8 725 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 TRIM24O15164 1050 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 CBFA2T3O75081 653 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 IMPDH2P12268 514 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 ITPKAP23677 461 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 ARHGDIAP52565 204 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 SOWAHCQ53LP3 525 aaPredicted RBP14.35□□□□□ -0.11
PTPN9-201ENST00000306726 FAM171A1Q5VUB5 890 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 GPR156Q8NFN8 814 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 OR56A4Q8NGH8 313 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 ACDQ96AP0 544 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 CCSER2Q9H7U1 834 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 TCRBV3S1A0A5B6 114 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 CLTBP09497 229 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 AKT1P31749 480 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 ZNF829Q3KNS6 432 aaPredicted RBP14.35□□□□□ -0.11
PTPN9-201ENST00000306726 FAM45BPQ6NSW5 357 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 PSAPL1Q6NUJ1 521 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 ZNF549Q6P9A3 640 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 PIANPQ8IYJ0 282 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 TBC1D21Q8IYX1 336 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 LMNTD1Q8N9Z9 388 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 FAM45AQ8TCE6 357 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 POLR1EQ9GZS1 481 aaKnown RBP14.35□□□□□ -0.11
PTPN9-201ENST00000306726 TRIM39Q9HCM9 518 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 BLOC1S6Q9UL45 172 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 ZFC3H1O60293 1989 aaKnown RBP14.35□□□□□ -0.11
PTPN9-201ENST00000306726 C2orf81A6NN90 581 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 GBAP04062 536 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 CD1DP15813 335 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 PAX3P23760 479 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
PTPN9-201ENST00000306726 MLLT10P55197 1068 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 HERC3Q15034 1050 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 CYBRD1Q53TN4 286 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 CYS1Q717R9 158 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 FAM217AQ8IXS0 508 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 HM13Q8TCT9 377 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 CDKN2AIPNLQ96HQ2 116 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 DPH2Q9BQC3 489 aaPredicted RBP14.35□□□□□ -0.11
PTPN9-201ENST00000306726 TLR9Q9NR96 1032 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 ABCC13Q9NSE7 274 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 GMPPBQ9Y5P6 360 aa14.35□□□□□ -0.11
PTPN9-201ENST00000306726 CACNA1CQ13936 2221 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 CARNS1A5YM72 827 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 CD47Q08722 323 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 CTXN3Q4LDR2 81 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 C6orf136Q5SQH8 315 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 PIK3R6Q5UE93 754 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 TMEM53Q6P2H8 277 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 RANBP10Q6VN20 620 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 ABHD11Q8NFV4 315 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 APOLD1Q96LR9 279 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 CHCHD6Q9BRQ6 235 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 ZYG11BQ9C0D3 744 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 SCUBE2Q9NQ36 999 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 HCSTQ9UBK5 93 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 ZNF232Q9UNY5 417 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 MUSKO15146 869 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 TCEA2Q15560 299 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 SULT1C3Q6IMI6 304 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 EID3Q8N140 333 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 LIX1Q8N485 282 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 TOP6BLQ8N6T0 577 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 DACT3Q96B18 629 aaPredicted RBP14.34□□□□□ -0.11
PTPN9-201ENST00000306726 OTULINQ96BN8 352 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 ZHX1-C8orf76Q96EF9 292 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 C11orf84Q9BUA3 381 aaPredicted RBP14.34□□□□□ -0.11
PTPN9-201ENST00000306726 SLC25A51Q9H1U9 297 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 VAPAQ9P0L0 249 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 SPO11Q9Y5K1 396 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 A0A0C4DFX4 3053 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 KRBA1A5PL33 1030 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 BCAS1O75363 584 aaPredicted RBP14.34□□□□□ -0.11
PTPN9-201ENST00000306726 C8BP07358 591 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 GSTT2P0CG29 244 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 GSTT2BP0CG30 244 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 BMP1P13497 986 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 WEE1P30291 646 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 MXD1Q05195 221 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 DUSP4Q13115 394 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 DAG1Q14118 895 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 CYP20A1Q6UW02 462 aa14.34□□□□□ -0.11
PTPN9-201ENST00000306726 C2orf73Q8N5S3 287 aaPredicted RBP14.34□□□□□ -0.11
PTPN9-201ENST00000306726 OR2T11Q8NH01 316 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms