RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 RAB6CQ9H0N0 254 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 TMEM245Q9H330 911 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 HRASLS2Q9NWW9 162 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 BIRC5O15392 142 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 DUX1O43812 170 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 FAM189A1O60320 539 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 HLA-FP30511 346 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 CRATP43155 626 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 MAPK10P53779 464 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 CLNS1AP54105 237 aaKnown RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 HYAL1Q12794 435 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 MED21Q13503 144 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 OLIG2Q13516 323 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 C9orf64Q5T6V5 341 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 MLIPQ5VWP3 458 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 RSPO2Q6UXX9 243 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 ADGRG2Q8IZP9 1017 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 AGGF1Q8N302 714 aaeCLIP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 ANKRD7Q92527 254 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 MYADMQ96S97 322 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 ZNF180Q9UJW8 692 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 IRAK3Q9Y616 596 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 ATP6AP2A0A1C7CYW4 349 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 A0A1W2PPM1 405 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 CFAP73A6NFT4 308 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 B3GALT2O43825 422 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 ATP6AP2O75787 350 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 LRATO95237 230 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 PAPSS2O95340 614 aaPredicted RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 HOXD9P28356 352 aaPredicted RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 MANFP55145 182 aaKnown RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 ZNF460Q14592 562 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 BNC2Q6ZN30 1099 aaPredicted RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 MTDHQ86UE4 582 aaKnown RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 TMEFF1Q8IYR6 380 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 MREGQ8N565 214 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 NPWQ8N729 165 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 LENG8Q96PV6 779 aaPredicted RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 TRAF6Q9Y4K3 522 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 DRGXA6NNA5 263 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 H3BNH8 94 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 PEX12O00623 359 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 MRASO14807 208 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 CBSLP0DN79 551 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 CHRM1P11229 460 aaPredicted RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 JUPP14923 745 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 NT5EP21589 574 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 PSMA4P25789 261 aaKnown RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 CBSP35520 551 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 MAPK12P53778 367 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 PLA2G16P53816 162 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 CYP4F3Q08477 520 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 SLC13A2Q13183 592 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 PTPRCAPQ14761 206 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 MAPKAPK3Q16644 382 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 ZC3H12BQ5HYM0 836 aaKnown RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 RIPOR1Q6ZS17 1223 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 CUZD1Q86UP6 607 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 SPPL2AQ8TCT8 520 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 ISG20Q96AZ6 181 aaKnown RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 SCRN2Q96FV2 425 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 C1orf50Q9BV19 199 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 FBXW2Q9UKT8 454 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 SNX7Q9UNH6 387 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 OR1A2Q9Y585 309 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 GTPBP1O00178 669 aaKnown RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 GFRA2O00451 464 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 HDAC3O15379 428 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 SMAD6O43541 496 aaKnown RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 GSTM1P09488 218 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 HNRNPH1P31943 449 aaKnown RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 SHMT2P34897 504 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 STC1P52823 247 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 BST1Q10588 318 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 TRABD2AQ86V40 505 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 DCBLD1Q8N8Z6 715 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 CAMKVQ8NCB2 501 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 CEP76Q8TAP6 659 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 KCTD14Q9BQ13 255 aaPredicted RBP9.1□□□□□ -0.95
PTPRE-202ENST00000306042 MCMBPQ9BTE3 642 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 TRIM39Q9HCM9 518 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 SEMA3GQ9NS98 782 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 COPS7AQ9UBW8 275 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 MYH10P35580 1976 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 CITO14578 2027 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 TCRBV7S3A2A0A539 114 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 KLHL33A6NCF5 533 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 UBXN8O00124 270 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 DCXO43602 365 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 TPST1O60507 370 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 KRT75O95678 551 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 CER1O95813 267 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 PREPP48147 710 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 HNMTP50135 292 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 ESRRGP62508 458 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 KCNJ11Q14654 390 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 LONP2Q86WA8 852 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 TMEM216Q9P0N5 145 aa9.1□□□□□ -0.95
PTPRE-202ENST00000306042 TAC3Q9UHF0 121 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms