RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ASLP04424 464 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 OR56A5P0C7T3 313 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 MRPL19P49406 292 aaKnown RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 ATXN3P54252 364 aaPredicted RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 UFM1P61960 85 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 CRY1Q16526 586 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 GSTA3Q16772 222 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 TTLL9Q3SXZ7 439 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 C9orf64Q5T6V5 341 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 LIPIQ6XZB0 460 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 HACD2Q6Y1H2 254 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 DHDDSQ86SQ9 333 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 KIAA1958Q8N8K9 716 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 HCAR2Q8TDS4 363 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 ASB11Q8WXH4 323 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 LRIG1Q96JA1 1093 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 EGFL8Q99944 293 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 C1orf50Q9BV19 199 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 BRINP2Q9C0B6 783 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 HPS4Q9NQG7 708 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 ADA2Q9NZK5 511 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 TMEM181Q9P2C4 612 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 TCF20Q9UGU0 1960 aaKnown RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 MUC22E2RYF6 1773 aaPredicted RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 TTC36A6NLP5 189 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 HEPACAM2A8MVW5 462 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 FXYD1O00168 92 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 CHEK2O96017 543 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 OTCP00480 354 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 ATP6V1C1P21283 382 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 IL12AP29459 219 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 PIK3CGP48736 1102 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 RPIAP49247 311 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 ERVK-8P63133 956 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 FLOT2Q14254 428 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 MUM1Q2TAK8 710 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 CMPK2Q5EBM0 449 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 IL27RAQ6UWB1 636 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 EFL1Q7Z2Z2 1120 aaKnown RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 MILR1Q7Z6M3 343 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 RASGRP3Q8IV61 690 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 TRAM1L1Q8N609 369 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 BHLHE22Q8NFJ8 381 aaPredicted RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 WFIKKN2Q8TEU8 576 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 NUDT8Q8WV74 236 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 SAMD11Q96NU1 681 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 SLC12A9Q9BXP2 914 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 PCDHAC1Q9H158 963 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 ACTL8Q9H568 366 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 SPAG4Q9NPE6 437 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 FARSBQ9NSD9 589 aaKnown RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 WWOXQ9NZC7 414 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 NFKBIL1Q9UBC1 381 aaPredicted RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 HCN2Q9UL51 889 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 RNF11Q9Y3C5 154 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 COL4A3Q01955 1670 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 OR2AG2A6NM03 316 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 LOC730098B7Z3J9 87 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 GFYI3L273 518 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 K7EPI3 171 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 PLK4O00444 970 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 TRIM38O00635 465 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 GIPC1O14908 333 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 LSM1O15116 133 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 FSHRP23945 695 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 AKT1P31749 480 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 GGT5P36269 586 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 BOP1Q14137 746 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 AAK1Q2M2I8 961 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 RFTN2Q52LD8 501 aaPredicted RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 RARS2Q5T160 578 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 LPCAT4Q643R3 524 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 TANGO2Q6ICL3 276 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 RASGEF1AQ8N9B8 481 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 DDHD1Q8NEL9 900 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 PROKR1Q8TCW9 393 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 BTN2A2Q8WVV5 523 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 VPS33AQ96AX1 596 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 ROPN1LQ96C74 230 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 CHFRQ96EP1 664 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 FAM129BQ96TA1 746 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 CCT7Q99832 543 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 P2RY13Q9BPV8 354 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 WRAP53Q9BUR4 548 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 SFXN1Q9H9B4 322 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 ZDHHC4Q9NPG8 344 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 OPTCQ9UBM4 332 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 CROTQ9UKG9 612 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 SLC8A2Q9UPR5 921 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 BBIP1A8MTZ0 92 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 EIF3FO00303 357 aaPredicted RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 KPNA3O00505 521 aaPredicted RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 ACADSP16219 412 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 ARL1P40616 181 aaPredicted RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 CTSCP53634 463 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 MRPS22P82650 360 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 GRIK2Q13002 908 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 RCAN2Q14206 197 aa6.41□□□□□ -1.38
USP47-201ENST00000305481 TRIM25Q14258 630 aaKnown RBP6.41□□□□□ -1.38
USP47-201ENST00000305481 C6orf10Q5SRN2 563 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms