RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 NLGN4YQ8NFZ3 816 aaPredicted RBP25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 OR6P1Q8NGX9 317 aa25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 OR4L1Q8NH43 312 aa25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 SPRY4Q9C004 299 aa25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 OR52A5Q9H2C5 316 aa25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 TRIT1Q9H3H1 467 aaKnown RBP25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 SEMA5BQ9P283 1151 aa25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 TMEM184BQ9Y519 407 aaPredicted RBP25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 PCDHGA4Q9Y5G9 962 aa25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 SDK2Q58EX2 2172 aa25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 LIN7AO14910 233 aaPredicted RBP25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 ZSCAN12O43309 604 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 STK17BO94768 372 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 OR56A5P0C7T3 313 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 NELFEP18615 380 aaKnown RBP25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 MAP4P27816 1152 aaKnown RBP25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 CDK16Q00536 496 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 FASTKD1Q53R41 847 aaKnown RBP25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 DNTTIP2Q5QJE6 756 aaKnown RBP25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 KIAA1614Q5VZ46 1190 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 KMT5CQ86Y97 462 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 RASGEF1CQ8N431 466 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 TTC9Q92623 222 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 ZNF778Q96MU6 729 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 OR6C1Q96RD1 312 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 FERD3LQ96RJ6 166 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 NAP1L3Q99457 506 aaPredicted RBP25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 IL22Q9GZX6 179 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 AHCTF1Q8WYP5 2266 aa25.77■■□□□ 1.72
CDKN2A-201ENST00000304494 TLCD2A6NGC4 264 aa25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 NPY2RP49146 381 aa25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 SESN2P58004 480 aaPredicted RBP25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 PPP1CAP62136 330 aa25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 SH3BP2P78314 561 aa25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 AARS2Q5JTZ9 985 aaKnown RBP25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 CARFQ8N187 725 aa25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 SLC41A2Q96JW4 573 aa25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 CHRAC1Q9NRG0 131 aa25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 BFARQ9NZS9 450 aa25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 ANAPC5Q9UJX4 755 aa25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 PRSS21Q9Y6M0 314 aa25.76■■□□□ 1.71
CDKN2A-201ENST00000304494 UBA6A0AVT1 1052 aaPredicted RBP25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 OR6C74A6NCV1 312 aa25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 TPSB2P20231 275 aa25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 PDHA2P29803 388 aa25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 PREPP48147 710 aa25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 PRKAA1Q13131 559 aa25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 TPSAB1Q15661 275 aa25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 PCSK4Q6UW60 755 aa25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 SIDT2Q8NBJ9 832 aaKnown RBP25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 LCN9Q8WX39 176 aa25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 ELMO1Q92556 727 aa25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 KIAA1143Q96AT1 154 aaPredicted RBP25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 ULBP3Q9BZM4 244 aa25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 MVB12BQ9H7P6 319 aa25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 TTC7AQ9ULT0 858 aaPredicted RBP25.75■■□□□ 1.71
CDKN2A-201ENST00000304494 ATMQ13315 3056 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 IGHV5-51A0A0C4DH38 117 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 MATN2O00339 956 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 ARL4DP49703 201 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 PLOD1Q02809 727 aaPredicted RBP25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 MAP7Q14244 749 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 SYTL3Q4VX76 610 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 ZNF534Q76KX8 674 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 RASGRP3Q8IV61 690 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 OR4E2Q8NGC2 313 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 TFGQ92734 400 aaPredicted RBP25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 MAP3K3Q99759 626 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 EFHD1Q9BUP0 239 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 TSSK1BQ9BXA7 367 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 SRMSQ9H3Y6 488 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 PDE7BQ9NP56 450 aa25.74■■□□□ 1.71
CDKN2A-201ENST00000304494 DLGAP3O95886 979 aa25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 ITGB2P05107 769 aa25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 FGF5P12034 268 aa25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 LIFP15018 202 aa25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 SARNPP82979 210 aaKnown RBP25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 ABHD18Q0P651 414 aa25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 LRRC8BQ6P9F7 803 aa25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 PPP1R3BQ86XI6 285 aa25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 REXO1L1PQ8IX06 675 aa25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 ESX1Q8N693 406 aa25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 ANP32BQ92688 251 aaKnown RBP25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 MAGOHBQ96A72 148 aaKnown RBP25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 TFB2MQ9H5Q4 396 aaKnown RBP25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 CATSPERZQ9NTU4 200 aa25.73■■□□□ 1.71
CDKN2A-201ENST00000304494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 OR1I1O60431 355 aa25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 WT1P19544 449 aaPredicted RBP25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 CRADDP78560 199 aa25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 HSD11B2P80365 405 aa25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 ACY1Q03154 408 aa25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 BOP1Q14137 746 aaKnown RBP25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 BPHLQ86WA6 291 aaPredicted RBP25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 PHC3Q8NDX5 983 aa25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 MS4A14Q96JA4 679 aa25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 GPN2Q9H9Y4 310 aaPredicted RBP25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 TREX1Q9NSU2 369 aa25.72■■□□□ 1.71
CDKN2A-201ENST00000304494 PGRMC1O00264 195 aaKnown RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms