RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 LEF1Q9UJU2 399 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 A0A0D9SEW6 157 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 TCRBV9S1A1TA0A576 114 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 MLLT10P55197 1068 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 PURAQ00577 322 aaKnown RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 ITIH4Q14624 930 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 CCDC92Q53HC0 331 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 LPCAT4Q643R3 524 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 SLC39A5Q6ZMH5 540 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 ADHFE1Q8IWW8 467 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 FATE1Q969F0 183 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 MRPL57Q9BQC6 102 aaKnown RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 C15orf38-AP3S2A0A0A6YYH1 394 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 HEPACAM2A8MVW5 462 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 AREL1O15033 823 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 RPP14O95059 124 aaKnown RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 NDST3O95803 873 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 TCF4P15884 667 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 VSX2P58304 361 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 TTMPQ5BVD1 217 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 BHLHB9Q6PI77 547 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 PIM3Q86V86 326 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 C8orf59Q8N0T1 100 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 OR2AJ1Q8NGZ0 328 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 STARD8Q92502 1023 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 NECTIN3Q9NQS3 549 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 DERAQ9Y315 318 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 PREX1Q8TCU6 1659 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 BTN3A3O00478 584 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 SUV39H1O43463 412 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 AKAP8O43823 692 aaKnown RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 SERPINB7O75635 380 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 SLC22A3O75751 556 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 BCL10O95999 233 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 BMP1P13497 986 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 RGS8P57771 180 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 SQLEQ14534 574 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 OSTM1Q86WC4 334 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 PLGRKTQ9HBL7 147 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 DNAAF2Q9NVR5 837 aaKnown RBP7.69□□□□□ -1.18
SCN9A-201ENST00000303354 AP4S1Q9Y587 144 aa7.69□□□□□ -1.18
SCN9A-201ENST00000303354 WNT9AO14904 365 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 CYP11A1P05108 521 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 MTHFRP42898 656 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 PREPP48147 710 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 PDX1P52945 283 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 TMEM31Q5JXX7 168 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 ANXA8L1Q5VT79 327 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 LCLAT1Q6UWP7 414 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 CCDC54Q8NEL0 328 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 MYLIPQ8WY64 445 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF516Q92618 1163 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 MMABQ96EY8 250 aaPredicted RBP7.68□□□□□ -1.18
SCN9A-201ENST00000303354 C8orf48Q96LL4 319 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 FBXL18Q96ME1 805 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 NUAK2Q9H093 628 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 KCTD3Q9Y597 815 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 CNTN5O94779 1100 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 HOXC6P09630 235 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 BLKP51451 505 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 LARS2Q15031 903 aaKnown RBP7.68□□□□□ -1.18
SCN9A-201ENST00000303354 EXOC3L1Q86VI1 746 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 TMPRSS6Q8IU80 811 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 TRPV3Q8NET8 790 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 PTCD2Q8WV60 388 aaKnown RBP7.68□□□□□ -1.18
SCN9A-201ENST00000303354 NUSAP1Q9BXS6 441 aaKnown RBP7.68□□□□□ -1.18
SCN9A-201ENST00000303354 FUT8Q9BYC5 575 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 TPRKBQ9Y3C4 175 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 A0A1B0GVT2 93 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 GPR89AB7ZAQ6 455 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 NOBOXO60393 691 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 OPN1SWP03999 348 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 JUNP05412 331 aaKnown RBP7.68□□□□□ -1.18
SCN9A-201ENST00000303354 GPR89BP0CG08 455 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 CES1P23141 567 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 PRMT9Q6P2P2 845 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 CREG2Q8IUH2 290 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 ZSCAN1Q8NBB4 408 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 PLA2G15Q8NCC3 412 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 MRIQ9BWK5 157 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 GBA3Q9H227 469 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 BRF2Q9HAW0 419 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 SETBP1Q9Y6X0 1596 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 TMEM150CB9EJG8 249 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 MFN2O95140 757 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 VNN1O95497 513 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF16P17020 682 aaPredicted RBP7.68□□□□□ -1.18
SCN9A-201ENST00000303354 MYL9P24844 172 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 ATP13A5Q4VNC0 1218 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 STRADAQ7RTN6 431 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 SNX33Q8WV41 574 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 PDLIM2Q96JY6 352 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 ABCB10Q9NRK6 738 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 GSTK1Q9Y2Q3 226 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 FZD9O00144 591 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 C2P06681 752 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 BMP6P22004 513 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 FAM69BQ5VUD6 431 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 FAM180BQ6P0A1 224 aa7.68□□□□□ -1.18
SCN9A-201ENST00000303354 CLEC20AQ6ZU45 233 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms