RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SLC7A4O43246 635 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 KATNA1O75449 491 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 NCF1P14598 390 aaPredicted RBP10.71□□□□□ -0.69
ZNF558-201ENST00000301475 MAXP61244 160 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 SYT16Q17RD7 645 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 CCDC58Q4VC31 144 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 AGAP6Q5VW22 663 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 ALKAL1Q6UXT8 129 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 Q6ZSR9 355 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 RIOX2Q8IUF8 465 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 OR10Q1Q8NGQ4 319 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 OR5K1Q8NHB7 308 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 RHEBL1Q8TAI7 183 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 AGAP4Q96P64 663 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 FBXL12Q9NXK8 326 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 UBQLN1Q9UMX0 589 aaKnown RBP10.71□□□□□ -0.69
ZNF558-201ENST00000301475 BOLA1Q9Y3E2 137 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 WDR90Q96KV7 1748 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 MFN2O95140 757 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 PARNO95453 639 aaKnown RBP10.71□□□□□ -0.69
ZNF558-201ENST00000301475 ITGAMP11215 1152 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 LIPAP38571 399 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 CLK3P49761 638 aaKnown RBP10.71□□□□□ -0.69
ZNF558-201ENST00000301475 TAF6P49848 677 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 IL18R1Q13478 541 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 VGLL4Q14135 290 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 KCTD2Q14681 263 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 TSNQ15631 228 aaKnown RBP10.71□□□□□ -0.69
ZNF558-201ENST00000301475 GPR162Q16538 588 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 PRSS36Q5K4E3 855 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 ANKS6Q68DC2 871 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 SYTL1Q8IYJ3 562 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 PARP16Q8N5Y8 322 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 TBCDQ9BTW9 1192 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 ARNT2Q9HBZ2 717 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 ATP13A1Q9HD20 1204 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 WDR70Q9NW82 654 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 PKP3Q9Y446 797 aa10.71□□□□□ -0.69
ZNF558-201ENST00000301475 OR2A25A4D2G3 310 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 CENPBD1B2RD01 187 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 KERAO60938 352 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 ECI2O75521 394 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 LGALS2P05162 132 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 ZNF286BP0CG31 522 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 G6PDP11413 515 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 IGFBP5P24593 272 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 EPHA2P29317 976 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 FADDQ13158 208 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 ARMCX2Q7L311 632 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 DET1Q7L5Y6 550 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 GATAD2AQ86YP4 633 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 BEND7Q8N7W2 519 aaPredicted RBP10.71□□□□□ -0.7
ZNF558-201ENST00000301475 ASCC1Q8N9N2 400 aaKnown RBP10.71□□□□□ -0.7
ZNF558-201ENST00000301475 ZNF540Q8NDQ6 660 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 TBATAQ96M53 351 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 ZNF560Q96MR9 790 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 MMP27Q9H306 513 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 RIBC2Q9H4K1 309 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 TFB2MQ9H5Q4 396 aaKnown RBP10.71□□□□□ -0.7
ZNF558-201ENST00000301475 ANKHQ9HCJ1 492 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 CRTAC1Q9NQ79 661 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 ZNF221Q9UK13 617 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 TPRKBQ9Y3C4 175 aa10.71□□□□□ -0.7
ZNF558-201ENST00000301475 MN1Q10571 1320 aaPredicted RBP10.7□□□□□ -0.7
ZNF558-201ENST00000301475 SMIM28A0A1B0GU29 152 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 MROH6A6NGR9 719 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 CLDN24A6NM45 220 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 AP3D1O14617 1153 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 DSCR3O14972 297 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 ANKRD28O15084 1053 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 GSTA4O15217 222 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 KMOO15229 486 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 RGS10O43665 173 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 KRT8P05787 483 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 PRSS56P0CW18 603 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 ALOX12P18054 663 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 KRT20P35900 424 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 HTR6P50406 440 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 SUOXP51687 545 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 TRAF3Q13114 568 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 PWP1Q13610 501 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 ZC3H12BQ5HYM0 836 aaKnown RBP10.7□□□□□ -0.7
ZNF558-201ENST00000301475 TPRG1LQ5T0D9 272 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 ARTNQ5T4W7 220 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 NXNL2Q5VZ03 156 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 WSCD1Q658N2 575 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 SLC27A1Q6PCB7 646 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 FKBP9P1Q75LS8 142 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 ELMO1Q92556 727 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 CDK15Q96Q40 435 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 NUSAP1Q9BXS6 441 aaKnown RBP10.7□□□□□ -0.7
ZNF558-201ENST00000301475 SPATC1LQ9H0A9 340 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 CNGB3Q9NQW8 809 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 DKK3Q9UBP4 350 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 PCTPQ9UKL6 214 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 RNF112Q9ULX5 631 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 GPSM3Q9Y4H4 160 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 ANKRD36A6QL64 1941 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 A0A0U1RQS6 177 aa10.7□□□□□ -0.7
ZNF558-201ENST00000301475 GRXCR2A6NFK2 248 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms