RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 S100BP04271 92 aaPredicted RBP15.26■□□□□ 0.03
LSM6-201ENST00000296581 AOC1P19801 751 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 DRD1P21728 446 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 CALB2P22676 271 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 EPHA3P29320 983 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 GPR1P46091 355 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 CTSCP53634 463 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 MRPS35P82673 323 aaKnown RBP15.26■□□□□ 0.03
LSM6-201ENST00000296581 MYBPC3Q14896 1274 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 UGT3A2Q3SY77 523 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 RAET1GQ6H3X3 334 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 SDE2Q6IQ49 451 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 ANO7Q6IWH7 933 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 TRPC4APQ8TEL6 797 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 UBE2ZQ9H832 354 aaPredicted RBP15.26■□□□□ 0.03
LSM6-201ENST00000296581 MEAF6Q9HAF1 191 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 ZBTB26Q9HCK0 441 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 MID1IP1Q9NPA3 183 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 LIMD1Q9UGP4 676 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 ASB1Q9Y576 335 aa15.26■□□□□ 0.03
LSM6-201ENST00000296581 OR2AG2A6NM03 316 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 PRR5-ARHGAP8B1AHC4 643 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 ADAM23O75077 832 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 NQO1P15559 274 aaKnown RBP15.25■□□□□ 0.03
LSM6-201ENST00000296581 VCLP18206 1134 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 RASSF2P50749 326 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 ARHGAP8P85298 464 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 HSPA14Q0VDF9 509 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 DYNC1I2Q13409 638 aaKnown RBP15.25■□□□□ 0.03
LSM6-201ENST00000296581 STARD3Q14849 445 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 FBXO48Q5FWF7 155 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 CDKL4Q5MAI5 379 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 KANK2Q63ZY3 851 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.25■□□□□ 0.03
LSM6-201ENST00000296581 HDDC3Q8N4P3 179 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 BEND7Q8N7W2 519 aaPredicted RBP15.25■□□□□ 0.03
LSM6-201ENST00000296581 ASZ1Q8WWH4 475 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 ELMO1Q92556 727 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 SEMA4BQ9NPR2 832 aaPredicted RBP15.25■□□□□ 0.03
LSM6-201ENST00000296581 SERGEFQ9UGK8 458 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 EIF2B4Q9UI10 523 aaKnown RBP15.25■□□□□ 0.03
LSM6-201ENST00000296581 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
LSM6-201ENST00000296581 TRIOBPQ9H2D6 2365 aa15.25■□□□□ 0.03
LSM6-201ENST00000296581 E9PBE3 544 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 KLHL41O60662 606 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 ATG13O75143 517 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 SLCO2B1O94956 709 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 MLYCDO95822 493 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 C8GP07360 202 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 ENO2P09104 434 aaPredicted RBP15.24■□□□□ 0.03
LSM6-201ENST00000296581 BOP1Q14137 746 aaKnown RBP15.24■□□□□ 0.03
LSM6-201ENST00000296581 AGERQ15109 404 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 BCL7AQ4VC05 210 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 SULT1C3Q6IMI6 304 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 CACUL1Q86Y37 369 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 RASGRP3Q8IV61 690 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 VRK3Q8IV63 474 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 ACTRT2Q8TDY3 377 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 UBTD2Q8WUN7 234 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 FAM161BQ96MY7 647 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 ZCCHC2Q9C0B9 1178 aaKnown RBP15.24■□□□□ 0.03
LSM6-201ENST00000296581 FIS1Q9Y3D6 152 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 TRPM6Q9BX84 2022 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 A0A1W2PP55 124 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 A0A1W2PQF6 199 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 AZIN1O14977 448 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 SLC16A5O15375 505 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 TAPBPO15533 448 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 KLF8O95600 359 aaPredicted RBP15.24■□□□□ 0.03
LSM6-201ENST00000296581 C7P10643 843 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 KCNJ2P63252 427 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 CDKL1Q00532 357 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 GRSF1Q12849 480 aaKnown RBP eCLIP15.24■□□□□ 0.03
LSM6-201ENST00000296581 SP140Q13342 867 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 CLEC6AQ6EIG7 209 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 METTL2BQ6P1Q9 378 aaKnown RBP15.24■□□□□ 0.03
LSM6-201ENST00000296581 TRMT11Q7Z4G4 463 aaKnown RBP15.24■□□□□ 0.03
LSM6-201ENST00000296581 ADGRG6Q86SQ4 1221 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 OR56A4Q8NGH8 313 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 ASB11Q8WXH4 323 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 ESAMQ96AP7 390 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 RHBDF1Q96CC6 855 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 PPP1R36Q96LQ0 422 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 CCM2Q9BSQ5 444 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 HGH1Q9BTY7 390 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 PHF7Q9BWX1 381 aaPredicted RBP15.24■□□□□ 0.03
LSM6-201ENST00000296581 SLC12A9Q9BXP2 914 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 MKRN2Q9H000 416 aaKnown RBP15.24■□□□□ 0.03
LSM6-201ENST00000296581 ZNF385DQ9H6B1 395 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 TAGLN3Q9UI15 199 aa15.24■□□□□ 0.03
LSM6-201ENST00000296581 A0A1B0GTL3 188 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 SOX1O00570 391 aaPredicted RBP15.23■□□□□ 0.03
LSM6-201ENST00000296581 LILRB5O75023 590 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 TM7SF2O76062 418 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 ESRRAP11474 423 aaPredicted RBP15.23■□□□□ 0.03
LSM6-201ENST00000296581 HOXB2P14652 356 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 NCF2P19878 526 aaPredicted RBP15.23■□□□□ 0.03
LSM6-201ENST00000296581 PTPN4P29074 926 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 MRPS21P82921 87 aaKnown RBP15.23■□□□□ 0.03
LSM6-201ENST00000296581 SFSWAPQ12872 951 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms