RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 ZNF449Q6P9G9 518 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 CERS6Q6ZMG9 384 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 B3GNT8Q7Z7M8 397 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 PCGF5Q86SE9 256 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 CACNA2D3Q8IZS8 1091 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 NAT8LQ8N9F0 302 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 OR10G6Q8NH81 332 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 ZCCHC14Q8WYQ9 949 aaKnown RBP11.84□□□□□ -0.51
HMGB2-201ENST00000296503 CCT6BQ92526 530 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 MFSD3Q96ES6 412 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 LINC00615Q96LM1 132 aaPredicted RBP11.84□□□□□ -0.51
HMGB2-201ENST00000296503 CCM2Q9BSQ5 444 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 MRM3Q9HC36 420 aaKnown RBP11.84□□□□□ -0.51
HMGB2-201ENST00000296503 CATSPERZQ9NTU4 200 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 SOX13Q9UN79 622 aa11.84□□□□□ -0.51
HMGB2-201ENST00000296503 C17orf113A0A1B0GUU1 675 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 DNALI1O14645 258 aaPredicted RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 AP2A2O94973 939 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 VAPBO95292 243 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 OR56A5P0C7T3 313 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 SCTRP47872 440 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 ATP1A2P50993 1020 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 UBE2IP63279 158 aaKnown RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 SLC7A5Q01650 507 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 RTP5Q14D33 572 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 C3orf38Q5JPI3 329 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 AARS2Q5JTZ9 985 aaKnown RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 SYDE1Q6ZW31 735 aaPredicted RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 MPP5Q8N3R9 675 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 NCSTNQ92542 709 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 SLCO2A1Q92959 643 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 RSRC1Q96IZ7 334 aaKnown RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 SEC16BQ96JE7 1060 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 SERPINB12Q96P63 405 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 KRT12Q99456 494 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 NUDT22Q9BRQ3 303 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 TBC1D10AQ9BXI6 508 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 WWP1Q9H0M0 922 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 TREX1Q9NSU2 369 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 NFU1Q9UMS0 254 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 SATB2Q9UPW6 733 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 PRSS21Q9Y6M0 314 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 CCDC187A0A096LP49 1063 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 PRAMEF33A0A0G2JMD5 474 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 F8W8V4 182 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 QSOX1O00391 747 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 DUX1O43812 170 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 OR1I1O60431 355 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 AMD1P17707 334 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 PAMP19021 973 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 MPSTP25325 297 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 GABREP78334 506 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 KRT33BQ14525 404 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 RPE65Q16518 533 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 CLPPQ16740 277 aaPredicted RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 ST3GAL2Q16842 350 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 RNASEH2BQ5TBB1 312 aaKnown RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 GKAP1Q5VSY0 366 aaPredicted RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 IZUMO3Q5VZ72 239 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 TMEM26Q6ZUK4 368 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 TMPRSS9Q7Z410 1059 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 SDCCAG8Q86SQ7 713 aaPredicted RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 LDB1Q86U70 411 aaPredicted RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 LILRA3Q8N6C8 439 aaPredicted RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 KDF1Q8NAX2 398 aaPredicted RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 WDR36Q8NI36 951 aaKnown RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 HM13Q8TCT9 377 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 INSM2Q96T92 566 aaPredicted RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 SEMA6CQ9H3T2 930 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 POLR1BQ9H9Y6 1135 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 POT1Q9NUX5 634 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 IMP3Q9NV31 184 aaKnown RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 CFAP20Q9Y6A4 193 aaKnown RBP11.83□□□□□ -0.52
HMGB2-201ENST00000296503 MAD1L1Q9Y6D9 718 aa11.83□□□□□ -0.52
HMGB2-201ENST00000296503 GOLGA8TH3BQL2 631 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 TTI1O43156 1089 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 NDUFS3O75489 264 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 FTH1P02794 183 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 SLC35G4P0C7Q5 338 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 HOXB3P14651 431 aaPredicted RBP11.82□□□□□ -0.52
HMGB2-201ENST00000296503 RBMS1P29558 406 aaKnown RBP11.82□□□□□ -0.52
HMGB2-201ENST00000296503 LSSP48449 732 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 TTPAP49638 278 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 PDX1P52945 283 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 EIF3BP55884 814 aaKnown RBP11.82□□□□□ -0.52
HMGB2-201ENST00000296503 PPP2R2AP63151 447 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 ZFP36L1Q07352 338 aaKnown RBP11.82□□□□□ -0.52
HMGB2-201ENST00000296503 SEMA3AQ14563 771 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 TTC19Q6DKK2 380 aaPredicted RBP11.82□□□□□ -0.52
HMGB2-201ENST00000296503 PACS1Q6VY07 963 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 ZNF574Q6ZN55 896 aaPredicted RBP11.82□□□□□ -0.52
HMGB2-201ENST00000296503 RAB11FIP2Q7L804 512 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 CROCCP2Q86T23 111 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 JAMLQ86YT9 394 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 RBM12BQ8IXT5 1001 aaKnown RBP11.82□□□□□ -0.52
HMGB2-201ENST00000296503 LSMEM2Q8N112 164 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 FBXO39Q8N4B4 442 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 SEC14L1Q92503 715 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 ELMO1Q92556 727 aa11.82□□□□□ -0.52
HMGB2-201ENST00000296503 C12orf66Q96MD2 445 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms