RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 SHBQ15464 509 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 SYTL3Q4VX76 610 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 UGT3A1Q6NUS8 523 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 SH2D5Q6ZV89 423 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 PIWIL4Q7Z3Z4 852 aaKnown RBP14.84□□□□□ -0.03
CCDC140-201ENST00000295226 SFTPA2Q8IWL1 248 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 HM13Q8TCT9 377 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 LMX1AQ8TE12 382 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 KCTD4Q8WVF5 259 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 ISL2Q96A47 359 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 LINGO1Q96FE5 620 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 LOXL4Q96JB6 756 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 TIMM29Q9BSF4 260 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 C12orf65Q9H3J6 166 aaKnown RBP14.84□□□□□ -0.03
CCDC140-201ENST00000295226 PRDM8Q9NQV8 689 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 LATS2Q9NRM7 1088 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 UCKL1Q9NWZ5 548 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 TLK1Q9UKI8 766 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 IKZF3Q9UKT9 509 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 WDR37Q9Y2I8 494 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 DNMT3AQ9Y6K1 912 aaPredicted RBP14.84□□□□□ -0.03
CCDC140-201ENST00000295226 RALGAPA1Q6GYQ0 2036 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 TRBV23OR9-2A0A075B6M9 112 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 C17orf113A0A1B0GUU1 675 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 F8W8V4 182 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 SPAG7O75391 227 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 GPC4O75487 556 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 KIAA0754O94854 1291 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 TSPAN12O95859 305 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 APOA4P06727 396 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 ZNF37AP17032 561 aaPredicted RBP14.84□□□□□ -0.03
CCDC140-201ENST00000295226 ACTR1BP42025 376 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 ACTR1AP61163 376 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 ABRQ12979 859 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 HLA-BQ31612 363 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 GKAP1Q5VSY0 366 aaPredicted RBP14.84□□□□□ -0.03
CCDC140-201ENST00000295226 METRNLQ641Q3 311 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 LAIR1Q6GTX8 287 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 SLC23A3Q6PIS1 610 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 TAF8Q7Z7C8 310 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 CPLX4Q7Z7G2 160 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 CENPLQ8N0S6 344 aaPredicted RBP14.84□□□□□ -0.03
CCDC140-201ENST00000295226 CEP76Q8TAP6 659 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 SKA2Q8WVK7 121 aaPredicted RBP14.84□□□□□ -0.03
CCDC140-201ENST00000295226 ASZ1Q8WWH4 475 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 TMEM159Q96B96 161 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 NXNL1Q96CM4 212 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 TRNAU1APQ9NX07 287 aaKnown RBP14.84□□□□□ -0.03
CCDC140-201ENST00000295226 TBC1D29Q9UFV1 150 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 GMEB2Q9UKD1 530 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 SLC6A14Q9UN76 642 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 ACOT9Q9Y305 439 aa14.84□□□□□ -0.03
CCDC140-201ENST00000295226 CFAP20Q9Y6A4 193 aaKnown RBP14.84□□□□□ -0.03
CCDC140-201ENST00000295226 ANKRD12Q6UB98 2062 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 SLCO2B1O94956 709 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 MPOP05164 745 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 CD9P21926 228 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 HOXD12P35452 270 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 BLKP51451 505 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 CLCNKAP51800 687 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 CORO7P57737 925 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 IL2P60568 153 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 DNAJC3Q13217 504 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 GBX1Q14549 363 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 PLEKHS1Q5SXH7 462 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 CYHR1Q6ZMK1 362 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 CFAP61Q8NHU2 1237 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 GPBAR1Q8TDU6 330 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 ELF4Q99607 663 aaPredicted RBP14.83□□□□□ -0.04
CCDC140-201ENST00000295226 GTPBP2Q9BX10 602 aaKnown RBP14.83□□□□□ -0.04
CCDC140-201ENST00000295226 WWP1Q9H0M0 922 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 IGSF5Q9NSI5 407 aa14.83□□□□□ -0.04
CCDC140-201ENST00000295226 SCHIP1Q9P0W5 487 aaPredicted RBP14.83□□□□□ -0.04
CCDC140-201ENST00000295226 PRR19A6NJB7 356 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 LIN7AO14910 233 aaPredicted RBP14.82□□□□□ -0.04
CCDC140-201ENST00000295226 KPNA5O15131 536 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 VCLP18206 1134 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 GLRBP48167 497 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 ILF2Q12905 390 aaKnown RBP14.82□□□□□ -0.04
CCDC140-201ENST00000295226 ILF3Q12906 894 aaKnown RBP eCLIP14.82□□□□□ -0.04
CCDC140-201ENST00000295226 SF3A2Q15428 464 aaKnown RBP14.82□□□□□ -0.04
CCDC140-201ENST00000295226 TTLL9Q3SXZ7 439 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 TAF1BQ53T94 588 aaPredicted RBP14.82□□□□□ -0.04
CCDC140-201ENST00000295226 PLA2G2CQ5R387 149 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 C16orf46Q6P387 395 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 CDHR3Q6ZTQ4 885 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 TBC1D1Q86TI0 1168 aaPredicted RBP14.82□□□□□ -0.04
CCDC140-201ENST00000295226 CNPY4Q8N129 248 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 ZNF548Q8NEK5 533 aaPredicted RBP14.82□□□□□ -0.04
CCDC140-201ENST00000295226 MDM1Q8TC05 714 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 UBXN10Q96LJ8 280 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 GAREM1Q9H706 876 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 ERVMER34-1Q9H9K5 563 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 POPDC3Q9HBV1 291 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 NKIRAS1Q9NYS0 192 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 TAAR2Q9P1P5 351 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 PCDHGA5Q9Y5G8 931 aa14.82□□□□□ -0.04
CCDC140-201ENST00000295226 A0A087X1B8 175 aa14.81□□□□□ -0.04
CCDC140-201ENST00000295226 PRAMEF33A0A0G2JMD5 474 aa14.81□□□□□ -0.04
CCDC140-201ENST00000295226 KRT87PA6NCN2 255 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms