RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 POLR3HQ9Y535 204 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 U3KQV3 271 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 ELOVL7A1L3X0 281 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 E7ENX8 843 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 AIREO43918 545 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 TIE1P35590 1138 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 CYP1B1Q16678 543 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 PTPN20Q4JDL3 420 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 LDLRAP1Q5SW96 308 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 C15orf39Q6ZRI6 1047 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 SPATA6LQ8N4H0 392 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 ATAD1Q8NBU5 361 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 CEP295NLQ96MC4 621 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 GUCD1Q96NT3 240 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC39A8Q9C0K1 460 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 GLOD4Q9HC38 313 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 NEK6Q9HC98 313 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 GPN1Q9HCN4 374 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 AP3D1O14617 1153 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 FAM189A1O60320 539 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 TBX10O75333 385 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 PSIP1O75475 530 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 CST3P01034 146 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 OR4Q2P0C623 313 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 GNPDA1P46926 289 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC18A1P54219 525 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 JAM2P57087 298 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 FASTKD3Q14CZ7 662 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 CMASQ8NFW8 434 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 RASSF5Q8WWW0 418 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 NXNL1Q96CM4 212 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 LINGO1Q96FE5 620 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 GATA5Q9BWX5 397 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 SYNDIG1Q9H7V2 258 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 SIX4Q9UIU6 781 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 TDRKHQ9Y2W6 561 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 CCDC189A1A4V9 331 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 KHDRBS3O75525 346 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 FTH1P02794 183 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 TNNI3P19429 210 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 PRKAG1P54619 331 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 CA9Q16790 459 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 SOWAHAQ2M3V2 549 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 TEX44Q53QW1 395 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 CNSTQ6PJW8 725 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 TMPRSS11AQ6ZMR5 421 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 KCTD8Q6ZWB6 473 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 TAS1R1Q7RTX1 841 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 COMMD2Q86X83 199 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 PLD5Q8N7P1 536 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 SCAIQ8N9R8 606 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 C17orf50Q8WW18 174 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 FCGR1BQ92637 280 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 DIRAS2Q96HU8 199 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 MRPL45Q9BRJ2 306 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 TPK1Q9H3S4 243 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 ALG2Q9H553 416 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 FBXL21Q9UKT6 434 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 SNX7Q9UNH6 387 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC27A5Q9Y2P5 690 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 KCNE2Q9Y6J6 123 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 LTBP2Q14767 1821 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 MTMR11A4FU01 709 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 LRCH4O75427 683 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 FAM155BO75949 473 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 DDX6P26196 483 aaKnown RBP eCLIP11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 MAGEA11P43364 429 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 OMPP47874 163 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 TPTEP56180 551 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 RFTN2Q52LD8 501 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 RFWD3Q6PCD5 774 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 LRTOMTQ8WZ04 291 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 ELMO1Q92556 727 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 CLSTN3Q9BQT9 956 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 YTHDF1Q9BYJ9 559 aaKnown RBP11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 ADAM7Q9H2U9 754 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 RASSF1Q9NS23 344 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC7A8Q9UHI5 535 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 PCDHGA10Q9Y5H3 936 aa11.68□□□□□ -0.54
SYNGAP1-201ENST00000293748 FOXN2P32314 431 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 HSF2Q03933 536 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC25A52Q3SY17 297 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 BRMS1LQ5PSV4 323 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 REP15Q6BDI9 236 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 MON1BQ7L1V2 547 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 CHPFQ8IZ52 775 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZFAND2BQ8WV99 257 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 CSPG4P5Q96PW8 444 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 PDP1Q9P0J1 537 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 WDR37Q9Y2I8 494 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 ALPK3Q96L96 1907 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 CHST10O43529 356 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 MPZL2O60487 215 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 NDUFS2O75306 463 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 KIR3DL1P43629 444 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 CERCAMQ5T4B2 595 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 LCN1P1Q5VSP4 162 aa11.67□□□□□ -0.54
SYNGAP1-201ENST00000293748 PRR23BQ6ZRT6 265 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms