RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.25■□□□□ 0.51
PCDH1-201ENST00000287008 ELOVL7A1L3X0 281 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 RCVRNP35243 200 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 AP1S2P56377 157 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 ACTR3P61158 418 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 MYBPC1Q00872 1141 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 HSPB3Q12988 150 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 NDUFAF6Q330K2 333 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 PDE12Q6L8Q7 609 aaKnown RBP18.25■□□□□ 0.51
PCDH1-201ENST00000287008 OVCA2Q8WZ82 227 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 MTERF1Q99551 399 aaKnown RBP18.25■□□□□ 0.51
PCDH1-201ENST00000287008 GTPBP2Q9BX10 602 aaKnown RBP18.25■□□□□ 0.51
PCDH1-201ENST00000287008 GSDMCQ9BYG8 508 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 C12orf65Q9H3J6 166 aaKnown RBP18.25■□□□□ 0.51
PCDH1-201ENST00000287008 CXorf56Q9H5V9 222 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 ERVK-11Q9UQG0 969 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 U3KQV3 271 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 CHRNA1P02708 482 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 GRM2Q14416 872 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 MS4A13Q5J8X5 152 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 RPTNQ6XPR3 784 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 SLC2A4RGQ9NR83 387 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 WWP2O00308 870 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 POP7O75817 140 aaKnown RBP18.25■□□□□ 0.51
PCDH1-201ENST00000287008 TNFP01375 233 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 IFNW1P05000 195 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 KCNJ2P63252 427 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 BROXQ5VW32 411 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 HDDC2Q7Z4H3 204 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 RALGPS2Q86X27 583 aaPredicted RBP18.25■□□□□ 0.51
PCDH1-201ENST00000287008 BADQ92934 168 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 ZBED6CLQ96FA7 236 aaPredicted RBP18.25■□□□□ 0.51
PCDH1-201ENST00000287008 MRPS26Q9BYN8 205 aaKnown RBP18.25■□□□□ 0.51
PCDH1-201ENST00000287008 KRT36O76013 467 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 RHOP08100 348 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 CPNE8Q86YQ8 564 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 CRISPLD1Q9H336 500 aa18.25■□□□□ 0.51
PCDH1-201ENST00000287008 RPL26L1Q9UNX3 145 aaKnown RBP18.25■□□□□ 0.51
PCDH1-201ENST00000287008 XKRYO14609 159 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 KIF1CO43896 1103 aaKnown RBP18.24■□□□□ 0.51
PCDH1-201ENST00000287008 ZNF8P17098 575 aaPredicted RBP18.24■□□□□ 0.51
PCDH1-201ENST00000287008 RALGDSQ12967 914 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 TXNRD3NBQ6F5E7 133 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 CLNKQ7Z7G1 428 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 SSU72Q9NP77 194 aaKnown RBP18.24■□□□□ 0.51
PCDH1-201ENST00000287008 LGALS13Q9UHV8 139 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 C9J4A7 227 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 ADSLP30566 484 aaPredicted RBP18.24■□□□□ 0.51
PCDH1-201ENST00000287008 MAPK10P53779 464 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 RPS14P62263 151 aaKnown RBP18.24■□□□□ 0.51
PCDH1-201ENST00000287008 RHAGQ02094 409 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 SIRPB2Q5JXA9 342 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 CMTR2Q8IYT2 770 aaKnown RBP18.24■□□□□ 0.51
PCDH1-201ENST00000287008 AMER2Q8N7J2 671 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 CNTD1Q8N815 330 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 PLEKHO2Q8TD55 490 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 RASSF5Q8WWW0 418 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 TAPBPLQ9BX59 468 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 PITPNM1O00562 1244 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 NPHS1O60500 1241 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 MMP20O60882 483 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 HNRNPA1P09651 372 aaKnown RBP eCLIP18.24■□□□□ 0.51
PCDH1-201ENST00000287008 RAB14P61106 215 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 UPP1Q16831 310 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 ASTE1Q2TB18 679 aaPredicted RBP18.24■□□□□ 0.51
PCDH1-201ENST00000287008 C17orf99Q6UX52 265 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 SLC38A4Q969I6 547 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 EBPLQ9BY08 206 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 GPR62Q9BZJ7 368 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 OGDHLQ9ULD0 1010 aa18.24■□□□□ 0.51
PCDH1-201ENST00000287008 RP1L1Q8IWN7 2480 aaPredicted RBP18.24■□□□□ 0.51
PCDH1-201ENST00000287008 HIPK1Q86Z02 1210 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 PYCR2Q96C36 320 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 CLDN7O95471 211 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 MSX2P35548 267 aaPredicted RBP18.23■□□□□ 0.51
PCDH1-201ENST00000287008 TCEAL5Q5H9L2 206 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 NAIF1Q69YI7 327 aaPredicted RBP18.23■□□□□ 0.51
PCDH1-201ENST00000287008 CYP2U1Q7Z449 544 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 GJD3Q8N144 294 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 GLB1L3Q8NCI6 653 aaPredicted RBP18.23■□□□□ 0.51
PCDH1-201ENST00000287008 ZNF624Q9P2J8 865 aaPredicted RBP18.23■□□□□ 0.51
PCDH1-201ENST00000287008 PIP5K1BO14986 540 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 HNMTP50135 292 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 CCR8P51685 355 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 PRKD1Q15139 912 aaPredicted RBP18.23■□□□□ 0.51
PCDH1-201ENST00000287008 PLEKHG6Q3KR16 790 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 AAGABQ6PD74 315 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 ISLR2Q6UXK2 745 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 LIX1Q8N485 282 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 ATP6V1C2Q8NEY4 427 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 SMPDL3AQ92484 453 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 PMEPA1Q969W9 287 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 SMG9Q9H0W8 520 aaKnown RBP18.23■□□□□ 0.51
PCDH1-201ENST00000287008 ALKBH4Q9NXW9 302 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 MRPS7Q9Y2R9 242 aaKnown RBP18.23■□□□□ 0.51
PCDH1-201ENST00000287008 LRRC37A3O60309 1634 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 RPL26P61254 145 aaKnown RBP18.23■□□□□ 0.51
PCDH1-201ENST00000287008 DPY19L1Q2PZI1 675 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 PTCHD4Q6ZW05 846 aa18.23■□□□□ 0.51
PCDH1-201ENST00000287008 FBXO15Q8NCQ5 510 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms