RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 TBX4P57082 545 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 CD47Q08722 323 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 MGAT3Q09327 533 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 SQLEQ14534 574 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 MAPRE2Q15555 327 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 DDR2Q16832 855 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 ZNF789Q5FWF6 425 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 TSTD2Q5T7W7 516 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 FAM205BPQ63HN1 556 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 RAP1GAP2Q684P5 730 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 FAM45BPQ6NSW5 357 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 C17orf99Q6UX52 265 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 PIWIL4Q7Z3Z4 852 aaKnown RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 ZNF438Q7Z4V0 828 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 CCDC117Q8IWD4 279 aaPredicted RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 KLHDC8BQ8IXV7 354 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 ANGPTL6Q8NI99 470 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 FAM45AQ8TCE6 357 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 PIK3R3Q92569 461 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 UPF1Q92900 1129 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 PHF21BQ96EK2 531 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 SUSD3Q96L08 255 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 SNX18Q96RF0 628 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 PKMYT1Q99640 499 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 RHNO1Q9BSD3 238 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 EML4Q9HC35 981 aaKnown RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 TREX1Q9NSU2 369 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 GMIPQ9P107 970 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 DNMT3LQ9UJW3 386 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 SCN4AP35499 1836 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 LINC00854A0A1B0GVQ3 168 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 TTC24A2A3L6 582 aaPredicted RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 MANSC4A6NHS7 340 aaPredicted RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 J3KR12 359 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 TNFRSF10BO14763 440 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 CPNE3O75131 537 aaKnown RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 HMBSP08397 361 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 LTA4HP09960 611 aaKnown RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 CCDC159P0C7I6 412 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 DBTP11182 482 aaKnown RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 PCMT1P22061 227 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 CASP2P42575 452 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 EFEMP1Q12805 493 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 EIF4EBP2Q13542 120 aaPredicted RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 SELPLGQ14242 412 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 MANEALQ5VSG8 457 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 MFSD14CQ5VZR4 134 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 LDB1Q86U70 411 aaPredicted RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 P2RY8Q86VZ1 359 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 PLD3Q8IV08 490 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 DCP1BQ8IZD4 617 aaKnown RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 PNPLA1Q8N8W4 532 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 CNIH3Q8TBE1 160 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 FAR1Q8WVX9 515 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 HDAC2Q92769 488 aaKnown RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 TSPAN17Q96FV3 270 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 TRIM15Q9C019 465 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 RRAGCQ9HB90 399 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 ZBTB20Q9HC78 741 aaPredicted RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 INTS10Q9NVR2 710 aaKnown RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 C14orf119Q9NWQ9 140 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 SNX6Q9UNH7 406 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 POLHQ9Y253 713 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 INVSQ9Y283 1065 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 MTF2Q9Y483 593 aaPredicted RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 PTGDR2Q9Y5Y4 395 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 KRT87PA6NCN2 255 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 SNTNA6NMZ2 147 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 C16orf96A6NNT2 1141 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 B8ZZF3 427 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 CCL22O00626 93 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 TRIM16O95361 564 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 KRT6AP02538 564 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 KRT6BP04259 564 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 THRBP10828 461 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 SLC2A3P11169 496 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 TYMPP19971 482 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 RRM2P31350 389 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 PTGS2P35354 604 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 GPR15P49685 360 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 DSC2Q02487 901 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 SLC10A7Q0GE19 358 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 PUS10Q3MIT2 529 aaKnown RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 HECTD2Q5U5R9 776 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 PIK3R6Q5UE93 754 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 LAIR2Q6ISS4 152 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 C8orf82Q6P1X6 216 aaPredicted RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 MON1AQ86VX9 555 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 LACC1Q8IV20 430 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 RYBPQ8N488 228 aaPredicted RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 SVOPQ8N4V2 548 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 CCDC126Q96EE4 140 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 HMCESQ96FZ2 354 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 ST6GAL2Q96JF0 529 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 TMEM74Q96NL1 305 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 FYTTD1Q96QD9 318 aaKnown RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 ZYG11BQ9C0D3 744 aa7.5□□□□□ -1.21
TRIM6-201ENST00000278302 MKRN2Q9H000 416 aaKnown RBP7.5□□□□□ -1.21
TRIM6-201ENST00000278302 OSER1Q9NX31 292 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms