RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 GTF2H2CQ6P1K8 395 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 DSG4Q86SJ6 1040 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 SUSD6Q92537 303 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 ATP6V1E2Q96A05 226 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 GBP5Q96PP8 586 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 TRIM54Q9BYV2 358 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 CD244Q9BZW8 370 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 TUBB1Q9H4B7 451 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 NOL11Q9H8H0 719 aaKnown RBP15.03■□□□□ -0
SF3B4-201ENST00000271628 PAPOLBQ9NRJ5 636 aaKnown RBP15.03■□□□□ -0
SF3B4-201ENST00000271628 SUN2Q9UH99 717 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 BCAP29Q9UHQ4 241 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 ZNF225Q9UK10 706 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 PLXNA2O75051 1894 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 KIF26AQ9ULI4 1882 aaPredicted RBP15.03■□□□□ -0
SF3B4-201ENST00000271628 ANKRD12Q6UB98 2062 aa15.03■□□□□ -0
SF3B4-201ENST00000271628 C5orf42Q9H799 3197 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 NUAK1O60285 661 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 HIST1H2AGP0C0S8 130 aaPredicted RBP15.02■□□□□ -0
SF3B4-201ENST00000271628 PIM1P11309 404 aaPredicted RBP15.02■□□□□ -0
SF3B4-201ENST00000271628 HIST1H2ADP20671 130 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 GJA4P35212 333 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 RPIAP49247 311 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 CDKL1Q00532 357 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 HSPA14Q0VDF9 509 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 HYAL1Q12794 435 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 GBX1Q14549 363 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 TCHHL1Q5QJ38 904 aaPredicted RBP15.02■□□□□ -0
SF3B4-201ENST00000271628 CES5AQ6NT32 575 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 CYP2U1Q7Z449 544 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 GOLGA7Q7Z5G4 137 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 DSELQ8IZU8 1212 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 RHBDF1Q96CC6 855 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 AP2M1Q96CW1 435 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 HIST1H2AHQ96KK5 128 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 HIST1H2AJQ99878 128 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 H2AFJQ9BTM1 129 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 SLC25A23Q9BV35 468 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 DYRK4Q9NR20 520 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 RIC8BQ9NVN3 520 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 CCDC167Q9P0B6 97 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 C6orf203Q9P0P8 240 aaPredicted RBP15.02■□□□□ -0
SF3B4-201ENST00000271628 POLG2Q9UHN1 485 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 ASB1Q9Y576 335 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 TIMM22Q9Y584 194 aa15.02■□□□□ -0
SF3B4-201ENST00000271628 A0A1B0GTL3 188 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 PABPN1LA6NDY0 278 aaKnown RBP15.02□□□□□ -0.01
SF3B4-201ENST00000271628 SLC16A5O15375 505 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 SORBS2O94875 1100 aaKnown RBP15.02□□□□□ -0.01
SF3B4-201ENST00000271628 OR4F21O95013 312 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 SNRPB2P08579 225 aaKnown RBP15.02□□□□□ -0.01
SF3B4-201ENST00000271628 LINC00032P0C843 101 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 HLA-EP13747 358 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 PRDX3P30048 256 aaKnown RBP15.02□□□□□ -0.01
SF3B4-201ENST00000271628 OPRD1P41143 372 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 PHKG1Q16816 387 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 AGKQ53H12 422 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 OGFOD2Q6N063 350 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 NEK10Q6ZWH5 1172 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 DET1Q7L5Y6 550 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 SPATA19Q7Z5L4 167 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 PHYKPLQ8IUZ5 450 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 PGAM4Q8N0Y7 254 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 TCAIMQ8N3R3 496 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 UBTD2Q8WUN7 234 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 ASZ1Q8WWH4 475 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 GLYATL1Q969I3 302 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 ELSPBP1Q96BH3 223 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 RCN3Q96D15 328 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 BTBD9Q96Q07 612 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 IPPKQ9H8X2 491 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 WWOXQ9NZC7 414 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 OPTCQ9UBM4 332 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 ANGPTL3Q9Y5C1 460 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 KIAA1549LQ6ZVL6 1849 aa15.02□□□□□ -0.01
SF3B4-201ENST00000271628 FADS2P1A8MWK0 482 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 C1QTNF3-AMACRE9PGA6 284 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 RFXAPO00287 272 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 TAPBPO15533 448 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 ZCCHC18P0CG32 403 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 HGFP14210 728 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 PIK3CGP48736 1102 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 ERVPABLB-1P60509 514 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 GRIK2Q13002 908 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 SP140Q13342 867 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 MMEL1Q495T6 779 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 TMEM126BQ8IUX1 230 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 GALNT15Q8N3T1 639 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 PHC3Q8NDX5 983 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
SF3B4-201ENST00000271628 OR52B6Q8NGF0 335 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 METTL6Q8TCB7 284 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 ZFAND2BQ8WV99 257 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 DLG3Q92796 817 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 FAM129BQ96TA1 746 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 SLC12A9Q9BXP2 914 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 PARVBQ9HBI1 364 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 FBRSL1Q9HCM7 1045 aaKnown RBP15.01□□□□□ -0.01
SF3B4-201ENST00000271628 PSMD13Q9UNM6 376 aa15.01□□□□□ -0.01
SF3B4-201ENST00000271628 MUC22E2RYF6 1773 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms