RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 FAM129BQ96TA1 746 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 S100A14Q9HCY8 104 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 PFDN4Q9NQP4 134 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 AIG1Q9NVV5 245 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 OPTCQ9UBM4 332 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 C5orf42Q9H799 3197 aa16.31■□□□□ 0.2
CCDC40-201ENST00000269318 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.3■□□□□ 0.2
CCDC40-201ENST00000269318 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.3■□□□□ 0.2
CCDC40-201ENST00000269318 K7EPI3 171 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 RFXAPO00287 272 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 WNT9AO14904 365 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 KPNA5O15131 536 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 CFLARO15519 480 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 C8GP07360 202 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 ENO2P09104 434 aaPredicted RBP16.3■□□□□ 0.2
CCDC40-201ENST00000269318 ANPEPP15144 967 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 MSH3P20585 1137 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 GGT5P36269 586 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 PSMD8P48556 350 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 RPIAP49247 311 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 HTR6P50406 440 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 SESN3P58005 492 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 AP2B1P63010 937 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 BOP1Q14137 746 aaKnown RBP16.3■□□□□ 0.2
CCDC40-201ENST00000269318 ACOX1Q15067 660 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 MMEL1Q495T6 779 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 ZNF648Q5T619 568 aaPredicted RBP16.3■□□□□ 0.2
CCDC40-201ENST00000269318 HACD2Q6Y1H2 254 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 RASGRP3Q8IV61 690 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 GLYATL1Q969I3 302 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 AP2M1Q96CW1 435 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 MRPL38Q96DV4 380 aaKnown RBP16.3■□□□□ 0.2
CCDC40-201ENST00000269318 DTD2Q96FN9 168 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 RIC8BQ9NVN3 520 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 HCN2Q9UL51 889 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 REV3LO60673 3130 aa16.3■□□□□ 0.2
CCDC40-201ENST00000269318 GFYI3L273 518 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 AREL1O15033 823 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 ANXA5P08758 320 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 NME5P56597 212 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 PSME3P61289 254 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 HYAL1Q12794 435 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 GRIK2Q13002 908 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 RUNX3Q13761 415 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 ZXDCQ2QGD7 858 aaPredicted RBP16.29■□□□□ 0.2
CCDC40-201ENST00000269318 LDLRAP1Q5SW96 308 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 NEK10Q6ZWH5 1172 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 UBE2R2Q712K3 238 aaPredicted RBP16.29■□□□□ 0.2
CCDC40-201ENST00000269318 CYP2U1Q7Z449 544 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 MILR1Q7Z6M3 343 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 RETREG3Q86VR2 466 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 BEND7Q8N7W2 519 aaPredicted RBP16.29■□□□□ 0.2
CCDC40-201ENST00000269318 ATP6V1E2Q96A05 226 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 CHFRQ96EP1 664 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 WRAP53Q9BUR4 548 aaKnown RBP16.29■□□□□ 0.2
CCDC40-201ENST00000269318 PLA2G2FQ9BZM2 168 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 PARVBQ9HBI1 364 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 SLC52A3Q9NQ40 469 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 MSRAQ9UJ68 235 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 LRRC42Q9Y546 428 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 BBIP1A8MTZ0 92 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 MRASO14807 208 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 SLC16A5O15375 505 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 KATNA1O75449 491 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 FTH1P02794 183 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 XRCC1P18887 633 aaPredicted RBP16.29■□□□□ 0.2
CCDC40-201ENST00000269318 GJA4P35212 333 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 ERVK-8P63133 956 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 CREB5Q02930 508 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 SP140Q13342 867 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 RAB30Q15771 203 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 C6orf136Q5SQH8 315 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 ANKRD54Q6NXT1 300 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 TTC23LQ6PF05 361 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 LRRC74BQ6ZQY2 392 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 SFRP1Q8N474 314 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 CPA6Q8N4T0 437 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 RASGEF1AQ8N9B8 481 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 ELMO1Q92556 727 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 ANKRD27Q96NW4 1050 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 NTMT1Q9BV86 223 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 BRINP2Q9C0B6 783 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 ARL15Q9NXU5 204 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 ANGPTL2Q9UKU9 493 aa16.29■□□□□ 0.2
CCDC40-201ENST00000269318 ANTXRLA6NF34 631 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 OR2AG2A6NM03 316 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 STK16O75716 305 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 SLCO2B1O94956 709 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 SOD1P00441 154 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 EPORP19235 508 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 CAPN3P20807 821 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 VHLP40337 213 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 ARL1P40616 181 aaPredicted RBP16.28■□□□□ 0.2
CCDC40-201ENST00000269318 ZFP36L2P47974 494 aaKnown RBP16.28■□□□□ 0.2
CCDC40-201ENST00000269318 CTSCP53634 463 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 ELP6Q0PNE2 266 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 FBXL19Q6PCT2 694 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 RNF165Q6ZSG1 346 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 ADGRG6Q86SQ4 1221 aa16.28■□□□□ 0.2
CCDC40-201ENST00000269318 KBTBD6Q86V97 674 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms