RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 IP6K3Q96PC2 410 aa13.84□□□□□ -0.19
COMMD4-201ENST00000267935 FERD3LQ96RJ6 166 aa13.84□□□□□ -0.19
COMMD4-201ENST00000267935 RUFY1Q96T51 708 aa13.84□□□□□ -0.19
COMMD4-201ENST00000267935 DNAJC7Q99615 494 aa13.84□□□□□ -0.19
COMMD4-201ENST00000267935 ACTR5Q9H9F9 607 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-201ENST00000267935 SAE1Q9UBE0 346 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-201ENST00000267935 TCFL5Q9UL49 500 aa13.84□□□□□ -0.19
COMMD4-201ENST00000267935 INTUQ9ULD6 942 aa13.84□□□□□ -0.19
COMMD4-201ENST00000267935 PADI2Q9Y2J8 665 aa13.84□□□□□ -0.19
COMMD4-201ENST00000267935 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.84□□□□□ -0.19
COMMD4-201ENST00000267935 SPTBN1Q01082 2364 aaKnown RBP13.84□□□□□ -0.19
COMMD4-201ENST00000267935 ICE1Q9Y2F5 2266 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 ZNF106Q9H2Y7 1883 aaKnown RBP13.83□□□□□ -0.2
COMMD4-201ENST00000267935 C17orf113A0A1B0GUU1 675 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 GSAPA4D1B5 854 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 C9J4A7 227 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 ZNF185O15231 689 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 PSTPIP1O43586 416 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 SRP72O76094 671 aaKnown RBP13.83□□□□□ -0.2
COMMD4-201ENST00000267935 CRTAMO95727 393 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 PTMSP20962 102 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 PTGIRP43119 386 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 UQCRFS1P47985 274 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 KPNA2P52292 529 aaKnown RBP13.83□□□□□ -0.2
COMMD4-201ENST00000267935 IL10RAQ13651 578 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 NOMO1Q15155 1222 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 TAF1AQ15573 450 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-201ENST00000267935 CCDC181Q5TID7 509 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 CPZQ66K79 652 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 ITPRIPL1Q6GPH6 555 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 SPOCD1Q6ZMY3 1216 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 RAB43Q86YS6 212 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 VPS37BQ9H9H4 285 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 NHEJ1Q9H9Q4 299 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-201ENST00000267935 GPR83Q9NYM4 423 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 C5AR2Q9P296 337 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 FAM8A1Q9UBU6 413 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 CRLS1Q9UJA2 301 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 AAR2Q9Y312 384 aaKnown RBP13.83□□□□□ -0.2
COMMD4-201ENST00000267935 USP9YO00507 2555 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-201ENST00000267935 SEC16AO15027 2179 aa13.83□□□□□ -0.2
COMMD4-201ENST00000267935 CCDC66A2RUB6 948 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 A6NL46 340 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 TMEM150CB9EJG8 249 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 H7C0C1 242 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 CEACAM4O75871 244 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 STK10O94804 968 aaKnown RBP13.82□□□□□ -0.2
COMMD4-201ENST00000267935 AGTP01019 485 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 MSL3P1P0C860 447 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 PRDX3P30048 256 aaKnown RBP13.82□□□□□ -0.2
COMMD4-201ENST00000267935 HADHAP40939 763 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 ATP5OP48047 213 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 ARCN1P48444 511 aaKnown RBP13.82□□□□□ -0.2
COMMD4-201ENST00000267935 TCEAL1Q15170 157 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 TAZQ16635 292 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 JMJD6Q6NYC1 403 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-201ENST00000267935 CCDC50Q8IVM0 306 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 GPR135Q8IZ08 494 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 GLIS1Q8NBF1 620 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 SLC38A9Q8NBW4 561 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 FDCSPQ8NFU4 85 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-201ENST00000267935 OR4K2Q8NGD2 314 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 HM13Q8TCT9 377 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 ADAMTS17Q8TE56 1095 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 PNPLA2Q96AD5 504 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 OXNAD1Q96HP4 312 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-201ENST00000267935 FER1L6-AS2Q96M78 137 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 PPP1R2P1Q96PQ5 205 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 DHRS4Q9BTZ2 278 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 TLR10Q9BXR5 811 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 MVB12BQ9H7P6 319 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 CASS4Q9NQ75 786 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 GPN3Q9UHW5 284 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-201ENST00000267935 POMT2Q9UKY4 750 aa13.82□□□□□ -0.2
COMMD4-201ENST00000267935 E7EQ34 232 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 F5H423 210 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-201ENST00000267935 PEX12O00623 359 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 SORBS2O94875 1100 aaKnown RBP13.81□□□□□ -0.2
COMMD4-201ENST00000267935 ALPPP05187 535 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 PECAM1P16284 738 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-201ENST00000267935 ITGALP20701 1170 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 CD151P48509 253 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 ITGA1P56199 1179 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 LAMB3Q13751 1172 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 LLGL1Q15334 1064 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 DUS1LQ6P1R4 473 aaKnown RBP13.81□□□□□ -0.2
COMMD4-201ENST00000267935 SARM1Q6SZW1 724 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 SYTL1Q8IYJ3 562 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 PRR7Q8TB68 274 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.81□□□□□ -0.2
COMMD4-201ENST00000267935 RBM41Q96IZ5 413 aaKnown RBP13.81□□□□□ -0.2
COMMD4-201ENST00000267935 COPS8Q99627 209 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 CHP1Q99653 195 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 C19orf43Q9BQ61 176 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 MFRPQ9BY79 579 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 SPTLC3Q9NUV7 552 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 HYOU1Q9Y4L1 999 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 ALG6Q9Y672 507 aa13.81□□□□□ -0.2
COMMD4-201ENST00000267935 ARL5AQ9Y689 179 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms